PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00012580-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 251aa    MW: 26710.8 Da    PI: 6.147
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00012580-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.97.9e-07214236325
                         XXCHHHCHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKk 25 
                         + +r+rr++kNRe+A rsR+RK+
  WALNUT_00012580-RA 214 AQQRQRRMIKNRESAARSRERKQ 236
                         679*******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.3E-6208236No hitNo description
PROSITE patternPS000360219234IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MASSKVMTST NSNSRKPDQP RRASSSSVTK AQSLSDHGRN TSAKANNLGS SSMTVDGLLR  60
TVYDSNPSTT ESTLLDAQIT VMETPTPVPS DSHPNGSSHA PKTVDEVWNE IVSGDRKECK  120
VEAPDEMMTL EDFLAKAGAV EEEDMKVVPS ERLSGGVFAF DSVTPSPFAA LDSVDGAIVG  180
FGNGVDVIAG AGAGAGAGRG KRGRAVLEPL DKAAQQRQRR MIKNRESAAR SRERKQVFDA  240
IIIILYDSVF H
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018848162.11e-172PREDICTED: G-box-binding factor 4 isoform X1
RefseqXP_018848163.11e-172PREDICTED: G-box-binding factor 4 isoform X2
SwissprotP427776e-31GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A2I4GW941e-171A0A2I4GW94_JUGRE; G-box-binding factor 4 isoform X2
TrEMBLA0A2I4GW961e-171A0A2I4GW96_JUGRE; G-box-binding factor 4 isoform X1
STRINGevm.model.supercontig_21.2074e-75(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.11e-44bZIP family protein