PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00010552-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 468aa    MW: 50843.9 Da    PI: 5.6832
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00010552-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.81.8e-16264321360
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                         + kr rr+ +NRe+ArrsR+RK+a + eLe+ v++L  eN++L k+l e+++++ +  
  WALNUT_00010552-RA 264 DAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRVENSSLLKRLTEITQKYNEAA 321
                         579************************************************9998765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.2E-20262326IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.6E-12263318No hitNo description
PROSITE profilePS5021711.783264319IPR004827Basic-leucine zipper domain
PfamPF001706.0E-14265318IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.27E-11266317No hitNo description
PROSITE patternPS000360269284IPR004827Basic-leucine zipper domain
PfamPF124988.0E-45333458IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MDRVFSVEEI SDQFWSAPLR PPPPTPHSQS RPLSAGSVSL DESSRMNRSE SEWAFQRFLQ  60
LEASSNAETQ TETKTETETS SAVHPNKDVV VEIGDDEDNT KNANNISNHN NIIRNKSPTS  120
TASTSSFGES CTAPFNAPPP NIPIDSDEYQ DFLKSKLNLA CAAVALTRGP LVKPQDSAAL  180
SDNGLQASNT SQLGSQAPSK GAGGDSSWSR EKDSNGSLGI PSLPVQKKSG VPARPTTSGS  240
SREQSDDEEV EGENELTENM HPTDAKRVRR MLSNRESARR SRRRKQAHLT ELETQVAQLR  300
VENSSLLKRL TEITQKYNEA AVDNRVLKAD VETLRAKVKM AEETVKRITG LNPLFHAMSD  360
ISSMGMPSIN GSPSDTSTDA AVPVQDNSNH HFFQPSMNNN MSTHDMGVNN GLADVTSVEN  420
VQRNSTVAAV VGSRMERTAS MQRVASLEHL EKRIRGGTSP CGTQSNGE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1278285RRSRRRKQ
2280285SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018826989.10.0PREDICTED: light-inducible protein CPRF2
SwissprotQ990901e-140CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A2I4F5S30.0A0A2I4F5S3_JUGRE; light-inducible protein CPRF2
STRINGXP_002531296.11e-174(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.22e-68bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]