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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00007835-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | bZIP | ||||||||
Protein Properties | Length: 150aa MW: 17570.1 Da PI: 10.6842 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37 | 7.5e-12 | 59 | 104 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 k rr+ +NRe+ArrsR RKk ++ L++k+ +L+ eN++Lk++l WALNUT_00007835-RA 59 KMLRRMKSNRESARRSRWRKKRHLADLKDKANQLKMENQELKNQLG 104 7789**************************************8775 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.3E-10 | 55 | 104 | No hit | No description |
SMART | SM00338 | 2.4E-11 | 55 | 119 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.611 | 57 | 103 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.6E-9 | 59 | 104 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.13E-11 | 59 | 109 | No hit | No description |
CDD | cd14702 | 8.78E-15 | 61 | 111 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 62 | 77 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence Send to blast |
MVLSQKPVEF RYPISKEIGF TTDELQQLLS FFHSGHSVGQ NSSTTSEDSF RAIYSNDEKM 60 LRRMKSNRES ARRSRWRKKR HLADLKDKAN QLKMENQELK NQLGLALRQS HAIGENNQEL 120 ILESMTLRAK LSNLYRILFT MQTPYKSMKS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018833784.1 | 1e-107 | PREDICTED: basic leucine zipper 9-like | ||||
TrEMBL | A0A2I4FQ50 | 1e-106 | A0A2I4FQ50_JUGRE; basic leucine zipper 9-like | ||||
STRING | XP_008220396.1 | 4e-42 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5996 | 30 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 5e-17 | basic leucine-zipper 5 |