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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00002903-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | bZIP | ||||||||
Protein Properties | Length: 303aa MW: 34015.8 Da PI: 8.1183 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.1 | 5e-10 | 15 | 55 | 3 | 40 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLea 40 + k rr+++NReAAr+sR+RKka++++Le+ + ++Le+ WALNUT_00002903-RA 15 DQKTLRRLAQNREAARKSRLRKKAYVQQLENsrlRLAQLEQ 55 56889*************************83334444444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.002 | 13 | 66 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.37 | 15 | 59 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.9E-7 | 16 | 56 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.37E-6 | 17 | 61 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-7 | 19 | 56 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 20 | 35 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.9E-30 | 102 | 175 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009909 | Biological Process | regulation of flower development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence Send to blast |
MVVDSVDQSK AKAADQKTLR RLAQNREAAR KSRLRKKAYV QQLENSRLRL AQLEQELQRT 60 RQQGAFSATG YSGDHIHSIN GNGSLAFDMD YARWLDEHNR LINDLRLALN SHMGDNELDV 120 LVDGVMVHYD EIFRLKSIGA KADVFHMLSG MWKTPAERCF MWLGGFRSSE LLKILGNHLE 180 PLTEQQLMGI CNLQQSSQQA EDALSQGMEA LQQSLVETLS STSLGSGGSG NVADYMGQMA 240 IAMGKLATLE NFLHQADLLR QQTLQQMHRI LTTRQAACAL LVISDYISRV RALSSLWLAR 300 PRE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018811819.1 | 0.0 | PREDICTED: transcription factor PERIANTHIA-like isoform X1 | ||||
Swissprot | Q5Z6N9 | 1e-164 | TGAL3_ORYSJ; Transcription factor TGAL3 | ||||
TrEMBL | A0A2I4DXE2 | 0.0 | A0A2I4DXE2_JUGRE; transcription factor PERIANTHIA-like isoform X1 | ||||
STRING | VIT_01s0011g03230.t01 | 0.0 | (Vitis vinifera) | ||||
STRING | POPTR_0008s11710.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6022 | 31 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68640.1 | 1e-145 | bZIP family protein |
Publications ? help Back to Top | |||
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