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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00001203-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | bZIP | ||||||||
Protein Properties | Length: 197aa MW: 22705.1 Da PI: 6.1514 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.8 | 3.1e-15 | 82 | 131 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +++rr+++NRe+ArrsR RK++ ++eL v L +eN++L+++l++ ++ WALNUT_00001203-RA 82 RKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIDKLNHASE 131 689***************************************99988766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.880.10 | 1.9E-5 | 47 | 96 | IPR008917 | Transcription factor, Skn-1-like, DNA-binding domain |
SMART | SM00338 | 1.2E-13 | 78 | 142 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.542 | 80 | 143 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.02E-13 | 82 | 131 | No hit | No description |
Pfam | PF00170 | 6.8E-13 | 82 | 131 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 7.68E-19 | 83 | 134 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 85 | 100 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.6E-12 | 97 | 156 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence Send to blast |
MQPSEVTALH YLVPPNPSPY PSHHFSMSQS CTPGIQLNQF SSPIYNFQFP QAQEFNPQSS 60 SFSSNSTSDE ADEQQLSLIN ERKQRRMISN RESARRSRMR KQKHLDELWS QVLWLRNENH 120 QLIDKLNHAS ESHDRVVQEN AQLKEEASEL RQMLNNMQIN SPFPSLRDLE DVPCNTAYLR 180 AESSNQSIST SSMDLLG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 94 | 101 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018816676.1 | 1e-143 | PREDICTED: basic leucine zipper 43-like | ||||
Swissprot | Q9FMC2 | 3e-45 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A2I4EBA7 | 1e-141 | A0A2I4EBA7_JUGRE; basic leucine zipper 43-like | ||||
STRING | VIT_14s0083g00700.t01 | 1e-97 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1604 | 33 | 99 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 2e-52 | basic leucine-zipper 42 |
Publications ? help Back to Top | |||
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