PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Jcr4S01425.10

Common Name

JCGZ_15028

Organism

Jatropha curcas

Taxonomic ID

180498

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha

Family

G2-like

Protein Properties

Length: 185aa MW: 21076.1 Da PI: 3.7878

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Jcr4S01425.10	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	37.6	5e-12	160	184	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 kprlrWtpeLH++Fv+av++LGG+ Jcr4S01425.10 160 KPRLRWTPELHNCFVRAVRHLGGPR 184 79*********************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	8.9E-10	158	182	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.6E-7	160	184	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence Send to blast
MEVFQGLEGA GDVPTNTHQR IDDFEIENGG LHYNLAQFEY ANEFELQPQL EYDSDVELVP 60 LFDEWDLDNA FLALQETLAP DPNPDPDPDP DPNLVNDHVV PLEEREVVVV VENEETPNDL 120 NIVNAYLVSP GEGDNEMVRD EEELHLFFPQ PSVIFSSDTK PRLRWTPELH NCFVRAVRHL 180 GGPRS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020538753.1	1e-133	uncharacterized protein LOC105643484 isoform X1
TrEMBL	A0A067LD64	1e-131	A0A067LD64_JATCU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF18800	5	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G06020.1	2e-09	G2-like family protein

Publications ? help Back to Top
Zhang L, et al. Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress. PLoS ONE, 2014. 9(5): p. e97878 [PMID:24837971]