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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc002023.1_g00008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | WRKY | ||||||||
Protein Properties | Length: 200aa MW: 22575.9 Da PI: 7.1596 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 33 | 1.2e-10 | 149 | 171 | 1 | 23 |
---SS-EEEEEEE--TT-SS-EE CS WRKY 1 ldDgynWrKYGqKevkgsefprs 23 ldDgy+WrKYG+K+vk++ +pr+ Itr_sc002023.1_g00008.1 149 LDDGYKWRKYGKKKVKSNSNPRN 171 59********************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.5E-10 | 135 | 172 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.75E-8 | 142 | 171 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 11.899 | 144 | 171 | IPR003657 | WRKY domain |
SMART | SM00774 | 9.0E-4 | 149 | 185 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.8E-7 | 150 | 183 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence Send to blast |
MSDMNPNFLG PNMRPTTPPS YTNPNSNNLH FSPEMLQDYD YDYTQDFELS YVNNLLNDDH 60 HHHYSNVVNN PFASSSSSLF SQPLVPPPTI VQDKSSTTSA SSGSSGFDGM MPTTYPIQEV 120 KSMRQMVNTT KAKERHSIAF RTKTELEMLD DGYKWRKYGK KKVKSNSNPR NNPLMTQKQD 180 PKCPNPDSRG SEELGNQGQG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019154566.1 | 1e-77 | PREDICTED: probable WRKY transcription factor 51 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13494 | 12 | 17 |