![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Itr_sc002023.1_g00004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 168aa MW: 18968.1 Da PI: 9.2579 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 30.3 | 8.4e-10 | 147 | 168 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYG+K+vk++ +pr Itr_sc002023.1_g00004.1 147 LDDGYKWRKYGKKKVKSNSNPR 168 59*******************9 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 6.1E-10 | 133 | 168 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.85E-8 | 140 | 168 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.622 | 142 | 168 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.4E-5 | 148 | 168 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 168 aa Download sequence Send to blast |
MSDMNPNFLG PNMMPTTPPS YTNPNSNNLH FPPEMIQDYA QDFDLSYVNT FLNDDHHHHY 60 SNVVNNPFAS SSSSLFSQPL LPPPTIVQDK SSTTSASSGS SGFDGMLPTT TTYPMQEVKS 120 TRQMVNRAKA KERHSVTFRT KTELEILDDG YKWRKYGKKK VKSNSNPR |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_019154566.1 | 1e-81 | PREDICTED: probable WRKY transcription factor 51 |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13494 | 12 | 17 |