PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han008684
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family bHLH
Protein Properties Length: 258aa    MW: 29022.2 Da    PI: 8.3357
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S48317228PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.52.7e-14136187155
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A+e++k+L+
  Han008684 136 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 187
                79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.66E-13134191No hitNo description
Gene3DG3DSA:4.10.280.104.6E-14134190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.18E-16135206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.199135186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-11136187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-10141192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MALETLSSNE LLNFIIYDTI SATPFTCNDS SETTTTNPCS SFFFHIQNQS SNPNPNPISQ  60
QLAGTAMEIM SSNSSLTTTT AKMSMAVQAY CSGNIAEKNY TNNNNNNNNI QNLGVQKKER  120
RRRSRVCKNK EEAETQRMTH IAVERNRRKQ MNEHLAVLRS LMPESYVQRG DQASIVGGAI  180
EFVKELEHLL QSLEAQKFVF TXQQEEXGGE DGNFTKLTSS AAPPFHXFFP TXHTLAPNFP  240
QYTSKARQPL RHRGTLIX
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136147RMTHIAVERNRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021969358.11e-132transcription factor bHLH94-like
TrEMBLA0A251UGB61e-131A0A251UGB6_HELAN; Putative myc-type, basic helix-loop-helix (BHLH) domain-containing protein
STRINGXP_009763212.12e-61(Nicotiana sylvestris)
STRINGXP_009631535.12e-61(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24140.11e-38bHLH family protein