PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han008374
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family bHLH
Protein Properties Length: 124aa    MW: 13678.5 Da    PI: 8.4599
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-169a-Helianthus_annuus-20617PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.39.8e-0732711054
               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
               + R d++ ++++ L++l+ +      +K + a++L +A+eYI+ L
  Han008374 32 KERKDKVGERIAALQQLVSPY-----GKTDTASVLLEAIEYIHFL 71
               789999*************99.....9***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.0172271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-92279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.45E-122686IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00132877IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.83E-73276No hitNo description
PfamPF000102.6E-43271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
MEHKWSPVSI EQGNLTSWTP KRHKAGLSIS PKERKDKVGE RIAALQQLVS PYGKTDTASV  60
LLEAIEYIHF LHDQVKVSSA LYLHSNPTAQ SQDLDSYNLK AKGLCLVPVS YMNGVGSSNG  120
ADIW
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021982041.13e-85transcription factor bHLH153-like
RefseqXP_021982049.13e-85transcription factor bHLH153-like
SwissprotQ7XJU22e-46BH153_ARATH; Transcription factor bHLH153
TrEMBLA0A251VRS87e-84A0A251VRS8_HELAN; Putative basic helix-loop-helix (BHLH) DNA-binding superfamily protein
STRINGVIT_05s0094g00480.t012e-58(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.58e-49bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]