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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Han007511 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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Family | G2-like | ||||||||
Protein Properties | Length: 194aa MW: 21303.3 Da PI: 8.8583 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 109.1 | 2.3e-34 | 16 | 70 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl Han007511 16 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 70 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 14.485 | 13 | 73 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 3.23E-18 | 15 | 70 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 9.4E-33 | 15 | 71 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.1E-26 | 16 | 71 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 5.5E-10 | 18 | 69 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 1.3E-21 | 103 | 148 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MDVVNGSNNS PSLASKQRLR WTHELHERFV DAVAQLGGPD RATPKGVLRV MGVQGLTIYH 60 VKSHLQKYRL AKYLPDSSSE GKAFDQKESG DMLSSLDGSS GLQITEQLKL QMEVQKRLHE 120 QLEVQKQLQL RIEAQGKYLK KIIEEQQRLG GVLADAPGAA DESKSXTDPM TPAAPGITER 180 RXALNTDSGS SIGX |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 8e-26 | 16 | 73 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 8e-26 | 16 | 73 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 8e-26 | 16 | 73 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 8e-26 | 16 | 73 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022025622.1 | 1e-133 | myb family transcription factor PHL7-like isoform X1 | ||||
Swissprot | Q9SJW0 | 6e-95 | PHL7_ARATH; Myb family transcription factor PHL7 | ||||
TrEMBL | A0A251RS11 | 1e-132 | A0A251RS11_HELAN; Putative myb-like HTH transcriptional regulator family protein | ||||
STRING | XP_002525238.1 | 1e-100 | (Ricinus communis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 9e-86 | G2-like family protein |