PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han006941
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family G2-like
Protein Properties Length: 222aa    MW: 24303.1 Da    PI: 4.7156
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-169a-Helianthus_annuus-27232PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.21.6e-27173222150
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHL 50 
                kpr+rWtpeLHe+Fveav++LGGse+AtPk +l+l +v++Lt++hvkSHL
  Han006941 173 KPRMRWTPELHESFVEAVNKLGGSERATPKGVLKLWNVESLTIYHVKSHL 222
                79***********************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015572.5E-19173222IPR006447Myb domain, plants
SuperFamilySSF466891.97E-13173222IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-23173222IPR009057Homeodomain-like
PfamPF002492.4E-6175221IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MNGQRWKSTP DCLQPSGKKQ LNSIDPSGAM SSQNYPLVSR SSSNQTPNFV NSQSTTVVSL  60
TGQNNAMPWG PASLEDLLEF TENVCVGNYQ IEAQNGLMPA DDHVRGPATD WQKWGVDFMS  120
VEDNIDSNWS EILADVDAPT LEAKQTQSIP QPPVLNIEVC PVSSPSSTGP GVKPRMRWTP  180
ELHESFVEAV NKLGGSERAT PKGVLKLWNV ESLTIYHVKS HL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-25173222251Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-25173222251Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-25173222150Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-25173222150Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-25173222150Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-25173222150Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-25173222251Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-25173222251Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-25173222251Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-25173222251Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-25173222251Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-25173222251Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022038332.11e-163protein PHOSPHATE STARVATION RESPONSE 1-like
TrEMBLA0A251USQ71e-161A0A251USQ7_HELAN; Putative myb domain, plant
STRINGPOPTR_0013s04530.12e-54(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G29000.45e-31G2-like family protein