PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han005723
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family bHLH
Protein Properties Length: 263aa    MW: 29188.2 Da    PI: 6.6318
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-169a-Helianthus_annuus-3450PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12e-10151198455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++iN+++  L+el+P +    +k    a++L k + +++sLq
  Han005723 151 SHSLAERARREKINTRMKLLQELVPGC----NKISGTAMVLDKIISHVQSLQ 198
                8*************************9....89999***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.06E-15145213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.43E-10145202No hitNo description
PROSITE profilePS5088814.462147197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-15148213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.1E-8151198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-9153203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MEEHVETSFQ SFQFVDDQIQ SMILAQPVQE INNSFTNLLD LSPNQAVKLL HSPDGFCSVF  60
PVMEMTSASD LPLSSPNFCN PVKREPIGAG FLHDSPSIFT DLIKSKSSST KRNKREKVRS  120
VKKMKNDAKA NEGEKVEYIH VRARRGEATD SHSLAERARR EKINTRMKLL QELVPGCNKI  180
SGTAMVLDKI ISHVQSLQHQ VEFLTMKLAA VQPDVDINLD NLIASESGSP MESNFTGMVS  240
PSLWVDGQVG VNTQQYGEPG LKS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021988242.10.0transcription factor bHLH48-like
TrEMBLA0A251TI950.0A0A251TI95_HELAN; Putative myc-type, basic helix-loop-helix (BHLH) domain-containing protein
STRINGXP_007145649.14e-67(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.22e-50bHLH family protein