PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han004425
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family G2-like
Protein Properties Length: 343aa    MW: 36979.9 Da    PI: 9.1833
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-169a-Helianthus_annuus-48292PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like92.73e-293790155
    G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
               kpr++W+ +LH++Fv av+qL G+ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl
  Han004425 37 KPRVVWSIDLHRKFVAAVNQL-GIEKAVPKRILDLMNVEGLTRENVASHLQKYRL 90
               79*******************.********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.4273493IPR017930Myb domain
SuperFamilySSF466891.79E-193494IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.4E-303595IPR009057Homeodomain-like
TIGRFAMsTIGR015575.3E-253790IPR006447Myb domain, plants
PfamPF002496.5E-63989IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MKGSGDPNGK FNRERKDEDE DVEDNGNEDD DSSTQKKPRV VWSIDLHRKF VAAVNQLGIE  60
KAVPKRILDL MNVEGLTREN VASHLQKYRL YLKRISQQAN MVVAFGGSKD ASSYMRMSSL  120
DGLGDFRSLS GSGRLPNAQI SSYSHSGMLG RLNSATGMTL HSLTGPSLIQ PTHTQNLTGS  180
VSSVSSLNKF QPVVLPTPPN HQPANLFQGI PTSFDLGQLQ QSNKPNIQLP DFNPVDESRI  240
FNGSSTFSTL GSQSSLNLAS SSSTFLDAPN FHDQLPPNGS LKYGYPASGN TVTGFGSNIT  300
STASVPLEGQ GQTQSQRQRH GQHGKQSYGQ YSSNAFSTLA AAA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A2e-263396164ARR10-B
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021990178.10.0two-component response regulator ARR12-like
TrEMBLA0A251TQ430.0A0A251TQ43_HELAN; Two-component response regulator
STRINGXP_009757804.13e-89(Nicotiana sylvestris)
STRINGXP_009593176.13e-89(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.18e-43response regulator 12