PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Han004179

Organism

Helianthus annuus

Taxonomic ID

4232

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus

Family

NAC

Protein Properties

Length: 404aa MW: 44851.7 Da PI: 4.0668

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-169a-Helianthus_annuus-11362	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	34.7	5.3e-11	20	52	96	128
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ + +kktLv+y+grap+g +tdWvmhey++ Han004179 20 EHLQSETKKTLVYYHGRAPSGLRTDWVMHEYTI 52 5556899************************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	15.978	1	75	IPR003441	NAC domain
SuperFamily	SSF101941	6.28E-14	25	75	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence Send to blast
XDNEXGTGKQ LEKTEPSNGE HLQSETKKTL VYYHGRAPSG LRTDWVMHEY TIDEEELKRC 60 SIAQQYYALY KVFKKSGAGP KNGEQYGAPF IEEEWEDDDC LDVDSLLVEK LKPIPTNEFS 120 NTNTLEEEQQ EEDGLGFSNE ILEFLNKVID EPEILPPLPQ FAENDGIFLI QPVSSEVEKD 180 FLEMDDLIGP DPKICGSADF GSFSDLDCYN GLDTIGSQYI ELHGGYADNL EYGPENSGLV 240 SEVSHGQAVH DELPVSYDDL WNHHDQGESS MLTSQTVPEP VSNTSSGVII EETQGKPEYY 300 INQCPENIEN NTNTDSWFSS ALWAFVDSIP TTPASASESS ALVNRAFERM SSFGRGKNVN 360 LAATDASAAS GNTTKRLEKP KPSRSSRRGI LYFSVLGVLC AILW

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence Send to blast

XDNEXGTGKQ LEKTEPSNGE HLQSETKKTL VYYHGRAPSG LRTDWVMHEY TIDEEELKRC  60
SIAQQYYALY KVFKKSGAGP KNGEQYGAPF IEEEWEDDDC LDVDSLLVEK LKPIPTNEFS  120
NTNTLEEEQQ EEDGLGFSNE ILEFLNKVID EPEILPPLPQ FAENDGIFLI QPVSSEVEKD  180
FLEMDDLIGP DPKICGSADF GSFSDLDCYN GLDTIGSQYI ELHGGYADNL EYGPENSGLV  240
SEVSHGQAVH DELPVSYDDL WNHHDQGESS MLTSQTVPEP VSNTSSGVII EETQGKPEYY  300
INQCPENIEN NTNTDSWFSS ALWAFVDSIP TTPASASESS ALVNRAFERM SSFGRGKNVN  360
LAATDASAAS GNTTKRLEKP KPSRSSRRGI LYFSVLGVLC AILW

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021987180.1	0.0	NAC domain-containing protein 17-like
TrEMBL	A0A251TFX2	0.0	A0A251TFX2_HELAN; Putative NAC domain containing protein 17

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	4e-31	NAC domain containing protein 17