PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han002940
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family ERF
Protein Properties Length: 231aa    MW: 25789.6 Da    PI: 7.8261
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S32089521PU_unrefUnigeneView CDS
PUT-169a-Helianthus_annuus-10161971PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.5e-1972121154
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                ++y+GVr ++ +gr++AeIrdp++   ++r++lg+f tae+Aa+a++aa++++ 
  Han002940  72 PRYRGVRKRP-WGRFAAEIRDPYK---KARVWLGTFNTAEDAARAYDAAARAFT 121
                68********.**********765...6**********************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.3E-1272120IPR001471AP2/ERF domain
CDDcd000183.46E-1872130No hitNo description
SuperFamilySSF541711.11E-2173131IPR016177DNA-binding domain
PROSITE profilePS5103223.44673130IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-3173130IPR001471AP2/ERF domain
SMARTSM003801.2E-3673136IPR001471AP2/ERF domain
PRINTSPR003677.3E-117485IPR001471AP2/ERF domain
PRINTSPR003677.3E-1196112IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
XDTCSNDNPF HFLHCGEKKI ITNKTITGKS TNLEKPMENN ISGCHNRWKR TFTRRINLTV  60
TVAKPDQNLH APRYRGVRKR PWGRFAAEIR DPYKKARVWL GTFNTAEDAA RAYDAAARAF  120
TGVKAKTNFP LLPLPEHEIT DRATQQVPTT SSLSSTVETA SWSRRSTPAA VVVGYDDGDC  180
RSNCDSSSTV VDDVSGEVKS AENKTMSFDL NLPPVIDEFE FDDDPLTTLC L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-2174131361ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A2e-2174131664ATERF1
3gcc_A2e-2174131664ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Han.17590.0bud| embryo| leaf
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022019230.11e-141ethylene-responsive transcription factor 3-like, partial
TrEMBLA0A2U1KRH62e-74A0A2U1KRH6_ARTAN; Ethylene-responsive transcription factor 3
STRINGGLYMA02G43500.17e-35(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.13e-22ethylene responsive element binding factor 4