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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Han002156 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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Family | ERF | ||||||||||||
Protein Properties | Length: 268aa MW: 30316.1 Da PI: 6.3296 | ||||||||||||
Description | ERF family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.7 | 2.2e-16 | 89 | 136 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkl 53 + +GVr +k +g+W++eIrd + + rkr++lg+f taeeA a+ a +k++ Han002156 89 KLTGVRLRK-WGKWASEIRDpF-T---RKRIWLGTFNTAEEASDAYMAKKKEF 136 678****99.**********55.3...4********************99987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.27E-18 | 88 | 129 | No hit | No description |
PROSITE profile | PS51032 | 17.082 | 89 | 147 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.1E-12 | 89 | 152 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.19E-15 | 89 | 137 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 6.2E-9 | 90 | 136 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.4E-7 | 90 | 101 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.5E-18 | 91 | 138 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.4E-7 | 112 | 128 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence Send to blast |
MATDLRVSKR FRNSTVTGDA SAIIGTNLRK VRVICSDPEA TDSSSDEEDC DRSQSGRRIV 60 CEIVIGAKPE EDGEVLERKE GLEEERKKKL TGVRLRKWGK WASEIRDPFT RKRIWLGTFN 120 TAEEASDAYM AKKKEFQARR VDLVNQNRQK LSKCEVGNGP VHWKKRWRGS VYDPARKQDV 180 DSDLEEEALK ALESMKRAQL SEVKSPKTEQ LSGGETGESN SGTTSVEDSR EEENMPPWMG 240 LGIDMLVIDN HGHLLGKFSR LDDDLKIC |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022011667.1 | 0.0 | ethylene-responsive transcription factor ERF106-like | ||||
TrEMBL | A0A251S7J6 | 0.0 | A0A251S7J6_HELAN; Putative DNA-binding domain-containing protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 8e-17 | ERF family protein |