PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han000682
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family NAC
Protein Properties Length: 453aa    MW: 49780.4 Da    PI: 4.6132
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S32083864PU_unrefUnigeneView CDS
PUT-169a-Helianthus_annuus-34536PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM143.21.4e-4471332128
        NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                + GfrF+Ptde lvv+yLk+k+ gk++   ++++ev+iy++ PwdLp k ++k+++ ewyfF++++kky++g r+nrat++g+Wkatgkd+ v   +g++
  Han000682   7 ATGFRFKPTDEILVVYYLKRKILGKRIAS-NAVAEVNIYDFCPWDLPdKsSLKSGDLEWYFFCPKSKKYSSGGRANRATETGFWKATGKDRYVEY-RGRT 104
                68************************999.88**************96347777888*************************************9.9999 PP

        NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                v + ktLvf+ gra++g++tdWv+heyr+
  Han000682 105 VATIKTLVFHLGRAKDGKRTDWVLHEYRM 133
                ***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.49E-544156IPR003441NAC domain
PROSITE profilePS5100551.6276156IPR003441NAC domain
PfamPF023651.3E-228133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
XRPYGLATGF RFKPTDEILV VYYLKRKILG KRIASNAVAE VNIYDFCPWD LPDKSSLKSG  60
DLEWYFFCPK SKKYSSGGRA NRATETGFWK ATGKDRYVEY RGRTVATIKT LVFHLGRAKD  120
GKRTDWVLHE YRMDDKQLAD AGVVQDTYVL CRIFKKSGAG PKNGAQYGAP FNEDEWDDDL  180
VSSIDSQAVV GLVGASITTD RKQTEPEPGS SIVTISATEP TSTLNYKQES LATTDIVEPG  240
TSGVTLSATE PTNTLNSKRK GPATSDMTEP AANKPYKPTS TMNYEQKGPA TTNITEPGLS  300
NVMLSANEPT KALNYKQKGP ATTDMTEPGS SNVMFSANEL TKTLNCKQKG PATMNMIVPQ  360
TTHGLSVTEP GSSERPTDDD MSFLEVIDQM LGAPEEAVNM EEDKIRTPNE DDAILGEWED  420
ILTADDLYTD GLKYTVDLYL NPDGPDLAEF FVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-42616217171NO APICAL MERISTEM PROTEIN
1ut4_B4e-42616217171NO APICAL MERISTEM PROTEIN
1ut7_A4e-42616217171NO APICAL MERISTEM PROTEIN
1ut7_B4e-42616217171NO APICAL MERISTEM PROTEIN
4dul_A4e-42616217171NAC domain-containing protein 19
4dul_B4e-42616217171NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022021435.10.0NAC domain-containing protein 83-like
TrEMBLA0A251VG460.0A0A251VG46_HELAN; Putative NAC domain-containing protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09330.42e-78NAC domain containing protein 82