PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.01G151800.1.p
Common NameGLYMA_01G151800, LOC100816365
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family BES1
Protein Properties Length: 657aa    MW: 74399.8 Da    PI: 6.0716
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.01G151800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822158.93.4e-49531981142
               DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasasp 90 
                          gg+g+k+++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+Vl+AL+reAGwvv++DGttyr+ + p+   + +gs+a +s+
  Glyma.01G151800.1.p  53 GGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVDADGTTYRQ-CPPP---SNVGSFAARSV 138
                          689*******************************************************************5.4444...69********* PP

               DUF822  91 esslq.sslkssalaspvesysaspksssfpspssldsislasa.......asllpvlsv 142
                          es+l+  sl++++++  +e++ a+++ ++ +sp+s+ds+ +a+        ++ +p+ +v
  Glyma.01G151800.1.p 139 ESQLSgGSLRNCSVKETIENQTAVLRIDECLSPASIDSVVIAERdsknekyTNARPINTV 198
                          *****9***********************************9886666555555555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.7E-5054201IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514451.17E-155219653IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.807.4E-170221652IPR013781Glycoside hydrolase, catalytic domain
PfamPF013734.4E-87242618IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.6E-58259273IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.6E-58280298IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.6E-58302323IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.6E-58395417IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.6E-58468487IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.6E-58502518IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.6E-58519530IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.6E-58537560IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.6E-58575597IPR001554Glycoside hydrolase, family 14
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 657 aa     Download sequence    Send to blast
MKSINDDAST QDVDPQSDHS SDYLAHPNSH PEPHPQPRRP RGFAAAPVTT NTGGKGKKER  60
EKEKERTKLR ERHRRAITSR MLAGLRQYGN FPLPARADMN DVLAALAREA GWVVDADGTT  120
YRQCPPPSNV GSFAARSVES QLSGGSLRNC SVKETIENQT AVLRIDECLS PASIDSVVIA  180
ERDSKNEKYT NARPINTVDC LEADQLMQDI HSGVHENDFT STPYVSVYVK LPAGIINKFC  240
QLIDPEGIKQ ELIHIKSLNV DGVVVDCWWG IVEGWSSQKY VWSGYRELFN IIREFKLKLQ  300
VVMAFHECGG NDSSDALISL PQWVLDIGKD NQDIFFTDRE GRRNTECLSW GIDKERVLKG  360
RTGIEVYFDM MRSFRTEFDD LFAEGLISAV EVGLGASGEL KYPSFSERMG WRYPGIGEFQ  420
CYDKYLQNSL RRAAKLHGHS FWARGPDNAG HYNSMPHETG FFCERGDYDN YYGRFFLHWY  480
SQTLIDHADN VLSLATLAFE ETKIIVKVPA VYWWYKTPSH AAELTAGYHN PTYQDGYSPV  540
FEVLRKHAVT MKFVCLGFHL SSQEAYEPLI DPEGLSWQVL NSAWDRGLMA AGENALLCYG  600
REGYKRLVEM AKPRNDPDCR HFSFFVYQQP SLLQANVCLS ELDFFVKCMH GEMSDL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wdq_A1e-12422461411401Beta-amylase
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.209120.0leaf| root
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.01G151800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1739601e-150AC173960.15 Glycine max cultivar Williams 82 clone gmw1-45c9, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003516502.10.0beta-amylase 8
RefseqXP_028239751.10.0beta-amylase 8-like
SwissprotQ9FH800.0BAM8_ARATH; Beta-amylase 8
TrEMBLA0A445M3900.0A0A445M390_GLYSO; Beta-amylase
TrEMBLK7K4000.0K7K400_SOYBN; Beta-amylase
STRINGGLYMA01G35500.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF119023032
Representative plantOGRP97651112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45300.10.0beta-amylase 2
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]