PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS62721.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 280aa    MW: 31733.9 Da    PI: 9.7261
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS62721.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.5e-20133183256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++ + kl+ge
  EPS62721.1 133 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAAMAYDREAFKLRGE 183
                 59******9.**********955...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.66E-34132192No hitNo description
Gene3DG3DSA:3.30.730.101.3E-32133191IPR001471AP2/ERF domain
SMARTSM003809.8E-38133196IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-23133192IPR016177DNA-binding domain
PROSITE profilePS5103223.169133190IPR001471AP2/ERF domain
PfamPF008471.9E-13134183IPR001471AP2/ERF domain
PRINTSPR003672.0E-11134145IPR001471AP2/ERF domain
PRINTSPR003672.0E-11156172IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
RQWSSVFGEA SFPDRPYKKK VVSPDRRSSD QSGFVFPFAI ENSQSLPESP LFLRPVPQQM  60
ISFGRRSLPL PPYFSSETAA AQFQRQQQQL LQYWSETLNL SPRGQATMMN RLRQNGKSFL  120
RPAMTPPLSA TKLYRGVRQR HWGKWVAEIR LPRNRTRLWL GTFDTAEEAA MAYDREAFKL  180
RGENARLNFP DHFIGRPPPP QNSPAEQPAP PIPDPETSEP NSDAAIIAPP PPPPPPPSSE  240
LVWGDMAELL LESFPARWGP VSPFWDDLDA NNNPILPQNL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-20132190463ATERF1
3gcc_A9e-20132190463ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in abiotic stress tolerance. Can directly regulate stress-related gene expression by binding to the DNA sequence 5'-[AG]CCGAC-3' (DRE element) of their promoter region. Involved in the regulation of stomatal closure movement under drought stress (PubMed:23625358). Acts as a positive regulator of drought stress response (PubMed:22095047). {ECO:0000269|PubMed:22095047, ECO:0000269|PubMed:23625358}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress (PubMed:18550687, PubMed:22095047, PubMed:23625358). Induced by salt stress (PubMed:22095047). Induced by abscisic acid (ABA) and heat stress (PubMed:23625358). {ECO:0000269|PubMed:18550687, ECO:0000269|PubMed:22095047, ECO:0000269|PubMed:23625358}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028071708.13e-80ethylene-responsive transcription factor ERF054-like
SwissprotQ9SKT13e-51ERF53_ARATH; Ethylene-responsive transcription factor ERF053
TrEMBLS8CDY60.0S8CDY6_9LAMI; Uncharacterized protein (Fragment)
STRINGSolyc07g054220.1.14e-78(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA47182136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.12e-51ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  3. Cheng MC,Hsieh EJ,Chen JH,Chen HY,Lin TP
    CORRECTION. Arabidopsis RGLG2, Functioning as a RING E3 Ligase, Interacts with AtERF53 and Negatively Regulates the Plant Drought Stress Response.
    Plant Physiol., 2016. 170(2): p. 1162-3
    [PMID:26826724]
  4. Huang KC,Lin WC,Cheng WH
    Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis.
    BMC Plant Biol., 2018. 18(1): p. 40
    [PMID:29490615]