PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010934944.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Trihelix
Protein Properties Length: 683aa    MW: 76094.1 Da    PI: 6.3512
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010934944.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix107.31e-33463547186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     rW+k ev+aLi++r+ +e+r+++  lk+plWeevs+ m++ g++rs+k+Ckekwen+nk+++k+ke+ kkr +++s+tcpyf+ql+
  XP_010934944.1 463 RWPKAEVHALIRVRSGLESRFQEPGLKGPLWEEVSSTMAAMGYHRSAKRCKEKWENINKYFRKTKESGKKR-PQHSKTCPYFHQLD 547
                     8********************************************************************98.9************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.725462520IPR017877Myb-like domain
CDDcd122033.19E-30462527No hitNo description
PfamPF138375.4E-24463549No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 683 aa     Download sequence    Send to blast
MQSGYGSVSE IQQFMMENCG SSIFSISSAT PPNPSVPTGP ADIHAATSQP LRYRPLHXPH  60
HHHQHXQPQT PPPLPPHFSH FHSIPITQQL FQQSHQFQLF HPQPQEQRRL IPQHQLGLDQ  120
ESGPENSTGG GGGGPSFLAT TMNFKLAVNE SSGGGSREGL NDEDSILQGD DGSESRLHHH  180
WQREEESAIK EPSWRPLDID YVNRNNKRYK EKEPETPTNK YCKKSKEGAE PDPGGHIIGG  240
NNYKLFSELE AIYKPGGSII GAGGGGPNRA GSGSALTGDE TALMPAATNP PGLAADHLVG  300
GSETSAGEEV PVKKFSKGSG RRKRKRRQQK QLSSITAFFE NLVKQLMDHQ ESLHRKFLEV  360
MERRDQERTV REEAWRRQEA AKSSREAAAR AQERALASSR EAAIISFLEK ITGETLRLPE  420
KPQFQAQFPE EPAETTENLP IEPSNAANNG DSNTDKVLFN ISRWPKAEVH ALIRVRSGLE  480
SRFQEPGLKG PLWEEVSSTM AAMGYHRSAK RCKEKWENIN KYFRKTKESG KKRPQHSKTC  540
PYFHQLDQLY SKSLNKSQPA SSSSPNANVA SATTSGTATD QGKDHSELLD AIIVSTDQQG  600
FKFPEMSSLQ FDFNGTDKDN NELHRKVGNN GEEEEDDDDD DEEGGRREKA EEREEGEGES  660
QVQPHQEEHH QHDSNLFFQS LQS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1319327GRRKRKRRQ
2320325RRKRKR
3320326RRKRKRR
4320327RRKRKRRQ
5321326RKRKRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010934944.30.0LOW QUALITY PROTEIN: trihelix transcription factor GTL1-like
TrEMBLA0A2H3YD970.0A0A2H3YD97_PHODC; trihelix transcription factor GTL1-like
STRINGXP_008796930.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63993547
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.24e-51Trihelix family protein