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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.I01942.1.p | ||||||||
Common Name | EUGRSUZ_I01942 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 81aa MW: 8741.98 Da PI: 9.1299 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 93.4 | 2e-29 | 22 | 77 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 ++rY eC kN+A s+GghavDGC+Efm+ geegtaaal CaACgCHR+FH+r v + Eucgr.I01942.1.p 22 TIRYGECEKNQAESIGGHAVDGCREFMAR-GEEGTAAALICAACGCHRSFHKRIVMT 77 79**************************8.999*******************98765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD125774 | 2.0E-19 | 22 | 78 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Pfam | PF04770 | 1.1E-27 | 23 | 73 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 2.8E-23 | 24 | 73 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 24.923 | 25 | 74 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 81 aa Download sequence Send to blast |
MKRVRVVVVK GSSASSRRRG ETIRYGECEK NQAESIGGHA VDGCREFMAR GEEGTAAALI 60 CAACGCHRSF HKRIVMTENQ * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Inhibits zinc finger homeodomain (ZHD) transcription factors by interacting with them to prevent both their nuclear localization and their DNA-binding properties. Involved in integrating signals from multiple hormones by regulating the expression of specific genes. {ECO:0000269|PubMed:21455630}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.I01942.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027187539.1 | 2e-27 | mini zinc finger protein 2-like | ||||
Refseq | XP_027187540.1 | 2e-27 | mini zinc finger protein 2-like | ||||
Swissprot | Q9LJW5 | 7e-26 | MIF2_ARATH; Mini zinc finger protein 2 | ||||
TrEMBL | A0A059AQD8 | 5e-50 | A0A059AQD8_EUCGR; Uncharacterized protein | ||||
STRING | XP_004489393.1 | 1e-26 | (Cicer arietinum) | ||||
STRING | XP_004489394.1 | 1e-26 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM944 | 28 | 114 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28917.1 | 8e-28 | mini zinc finger 2 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.I01942.1.p |
Publications ? help Back to Top | |||
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