PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.D00577.1.p
Common NameEUGRSUZ_D00577, WOX9
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WOX
Protein Properties Length: 367aa    MW: 40066.4 Da    PI: 8.3877
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.D00577.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.25.9e-1856116257
                       T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                       ++R+++++eq+++Le+ F +   +p +ee++++ ++l    ++ +++V++WFqNr+ + k+
  Eucgr.D00577.1.p  56 KPRWNPKPEQIRILEAIFDSgMVNPPREEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 116
                       89*****************99*************************************995 PP
2Wus_type_Homeobox111.74e-3655117264
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                        +++RW+P+peQi+iLe++++sG+++P++eei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k
   Eucgr.D00577.1.p  55 PKPRWNPKPEQIRILEAIFDSGMVNPPREEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 117
                        689**********************************************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.60852117IPR001356Homeobox domain
SuperFamilySSF466894.28E-1252121IPR009057Homeodomain-like
SMARTSM003896.5E-954121IPR001356Homeobox domain
CDDcd000861.18E-855117No hitNo description
Gene3DG3DSA:1.10.10.601.3E-656115IPR009057Homeodomain-like
PfamPF000461.3E-1556116IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008284Biological Processpositive regulation of cell proliferation
GO:0030010Biological Processestablishment of cell polarity
GO:0048825Biological Processcotyledon development
GO:0090451Biological Processcotyledon boundary formation
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MASSNRHWPS MFKSKPCNTQ HHQWQHDLNP SLLSSSGCHK TSPYSSGCEE RTPEPKPRWN  60
PKPEQIRILE AIFDSGMVNP PREEIRKIRA QLQEYGQVGD ANVFYWFQNR KSRSKHKLRH  120
LQTSKQQKQQ QNQNTNTSSN NQNFNPITSS MSPTVTAPNS SSSSSSSDRT SPTGHQGVST  180
CGFPQSGQGF CFSPLTSVVQ VPHEQSPNIG PCTSLLLSEI LNNNNNNNNN NAAGSEKLGQ  240
GDHHKMKMMQ LPTSSLGNNY SVINPLGVTH SAVPATVTTS LPLPSTNIDN VQGVPEASNE  300
AKSTVFINDV AFQVASGPFN VREAFGDDAV LINASGQLVL TNEWGLTLQS LQHGASYYLV  360
TIIIIS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.D00577.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF9640240.0KF964024.1 Eucalyptus grandis isolate EG5 WOX9 (WOX9) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018728323.10.0PREDICTED: WUSCHEL-related homeobox 9
TrEMBLA0A059CCJ80.0A0A059CCJ8_EUCGR; WOX9
STRINGXP_010054342.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM72062640
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33880.12e-66homeobox-3