PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0301s00003.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family HB-other
Protein Properties Length: 1240aa    MW: 132977 Da    PI: 6.0175
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0301s00003.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.13.4e-092772247
                          T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHH CS
              Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvW 47
                           +Rt++t+ q e+Le+ +  n+ p ae+++ L +++gL+e+q+++W
  Dusal.0301s00003.1.p 27 ASRTQMTPLQKEVLEASYTLNPFPPAEHKRSLGERIGLDEKQISTW 72
                          68******************************************** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-111672IPR009057Homeodomain-like
SuperFamilySSF466894.71E-81972IPR009057Homeodomain-like
PROSITE profilePS5007110.4792372IPR001356Homeobox domain
CDDcd000861.90E-72672No hitNo description
PfamPF000467.2E-72772IPR001356Homeobox domain
PROSITE profilePS5082712.15213274IPR018501DDT domain
PfamPF027915.7E-5219268IPR018501DDT domain
PfamPF050661.4E-10388455IPR007759HB1/Asxl, restriction endonuclease HTH domain
PfamPF156132.2E-11699779IPR028941WHIM2 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1240 aa     Download sequence    Send to blast
MSAEQPKDEG TVGVEKASPG NEVAKKASRT QMTPLQKEVL EASYTLNPFP PAEHKRSLGE  60
RIGLDEKQIS TWEDGPPLGW DFDELPQAAI EAGVGGKHRR SEPIASAGPA SKAPRTADQS  120
GTVHRGIPPL SSADKSRLRA EEREQKRLDA IKERERKNEE KKKEREDKKR EREMMRANER  180
QEKLLSKGKG VQAQAGPPDD LDLEWSRLLE VGTEVGTEVL MVAAFLNSFS DVLGMAPPPS  240
ADQIAQAVHD GQDSLLLGAI HISMLRLVQA DMEEAHASGA ASVSAAGPGS AGHHFDRAMI  300
SAAHMLEGCW GWGYDMDSWR AHLNALTWPE VLRQLAVVGT SGSPRQKQGR GRRPSNVHKA  360
KMGVEGEDVV EDEQGNLKLR LPNRLGIGTV KAASWQVLAE VGPEGLPIAE MAHRIHESGL  420
RDFKYTKQPE ATVAGALARD VLFTRVGPAQ YALSSIIKHK LNATSAQDGA GPEGKTEGMD  480
VDEHDGQRAN QQQGAPEGTE EGDSGGEDDD DEGGNEDRGG TGEGGRPGAS QPKAPWVGIL  540
AASDYDALNV GERLAALAWL IHTVCDSPTV RLLLDARVDQ AINDKKEIVE MGKEIKKKRL  600
EDAYVKSRAA ADVASKKMAE LQAVGGSLPG YPPPAAMPLN FDPQLAGAAS AAAQRAMEDA  660
AVAARLVSEV AKDDSEEEKL AHQRRMDALA RVDEETAIQL QPLGMDRRYN RYWRVAPVGC  720
DSGEVALGAQ DPGIGRVFVE AADGSSWRLI QQPEQLDGLS AALDPRGARE GGLAAALNRL  780
GPAIKRAMPS SPLTVDLRGA STSGPACPGA GPLQQHQQQH LARQLRFVRP QATLFPASAE  840
VKPLVGEPVR PSKLKEDVLR IGAALPEPAL HFDFDRAAWQ QAVLQASNPL ALRQCVGRLE  900
ASVVPDYLSA AYNRNPQILK AAWSSAQRQQ QEAEALVATS AEGAPSEADQ QLAMEEPLSW  960
LPPTYAAVAL RLQALDAALY FAPQTRCGRD RLAGYRYILR PAPVPRPTAL EQLRQQMQQQ  1020
QQQQQHPEQQ QNQQQQQQGE GIASRCDVLT SGMVPLAYGG TLTAHGRLKP ALFFPELPLA  1080
YMSQDQQRMH LPLEQLRAAV AEAAAAGSLV PPTHASAADG AAAAAAAAGE GRGGRSAAAA  1140
HDAIQAQKCE RKDAMVRASA AVRSLASRVA SARGSSKHDK FAKARSHKAK KVRQSNLSKQ  1200
LAREKGGIGS EEEGPDYGEG YDDGFEEMDM LGGENANGE*
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP510588
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28420.12e-34homeobox-1