PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dusal.0301s00003.1.p

Organism

Dunaliella salina

Taxonomic ID

3046

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella

Family

HB-other

Protein Properties

Length: 1240aa MW: 132977 Da PI: 6.0175

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dusal.0301s00003.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.1	3.4e-09	27	72	2	47
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvW 47 +Rt++t+ q e+Le+ + n+ p ae+++ L +++gL+e+q+++W Dusal.0301s00003.1.p 27 ASRTQMTPLQKEVLEASYTLNPFPPAEHKRSLGERIGLDEKQISTW 72 68******************************************** PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.2E-11	16	72	IPR009057	Homeodomain-like
SuperFamily	SSF46689	4.71E-8	19	72	IPR009057	Homeodomain-like
PROSITE profile	PS50071	10.479	23	72	IPR001356	Homeobox domain
CDD	cd00086	1.90E-7	26	72	No hit	No description
Pfam	PF00046	7.2E-7	27	72	IPR001356	Homeobox domain
PROSITE profile	PS50827	12.15	213	274	IPR018501	DDT domain
Pfam	PF02791	5.7E-5	219	268	IPR018501	DDT domain
Pfam	PF05066	1.4E-10	388	455	IPR007759	HB1/Asxl, restriction endonuclease HTH domain
Pfam	PF15613	2.2E-11	699	779	IPR028941	WHIM2 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0010228	Biological Process	vegetative to reproductive phase transition of meristem
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1240 aa Download sequence Send to blast
MSAEQPKDEG TVGVEKASPG NEVAKKASRT QMTPLQKEVL EASYTLNPFP PAEHKRSLGE 60 RIGLDEKQIS TWEDGPPLGW DFDELPQAAI EAGVGGKHRR SEPIASAGPA SKAPRTADQS 120 GTVHRGIPPL SSADKSRLRA EEREQKRLDA IKERERKNEE KKKEREDKKR EREMMRANER 180 QEKLLSKGKG VQAQAGPPDD LDLEWSRLLE VGTEVGTEVL MVAAFLNSFS DVLGMAPPPS 240 ADQIAQAVHD GQDSLLLGAI HISMLRLVQA DMEEAHASGA ASVSAAGPGS AGHHFDRAMI 300 SAAHMLEGCW GWGYDMDSWR AHLNALTWPE VLRQLAVVGT SGSPRQKQGR GRRPSNVHKA 360 KMGVEGEDVV EDEQGNLKLR LPNRLGIGTV KAASWQVLAE VGPEGLPIAE MAHRIHESGL 420 RDFKYTKQPE ATVAGALARD VLFTRVGPAQ YALSSIIKHK LNATSAQDGA GPEGKTEGMD 480 VDEHDGQRAN QQQGAPEGTE EGDSGGEDDD DEGGNEDRGG TGEGGRPGAS QPKAPWVGIL 540 AASDYDALNV GERLAALAWL IHTVCDSPTV RLLLDARVDQ AINDKKEIVE MGKEIKKKRL 600 EDAYVKSRAA ADVASKKMAE LQAVGGSLPG YPPPAAMPLN FDPQLAGAAS AAAQRAMEDA 660 AVAARLVSEV AKDDSEEEKL AHQRRMDALA RVDEETAIQL QPLGMDRRYN RYWRVAPVGC 720 DSGEVALGAQ DPGIGRVFVE AADGSSWRLI QQPEQLDGLS AALDPRGARE GGLAAALNRL 780 GPAIKRAMPS SPLTVDLRGA STSGPACPGA GPLQQHQQQH LARQLRFVRP QATLFPASAE 840 VKPLVGEPVR PSKLKEDVLR IGAALPEPAL HFDFDRAAWQ QAVLQASNPL ALRQCVGRLE 900 ASVVPDYLSA AYNRNPQILK AAWSSAQRQQ QEAEALVATS AEGAPSEADQ QLAMEEPLSW 960 LPPTYAAVAL RLQALDAALY FAPQTRCGRD RLAGYRYILR PAPVPRPTAL EQLRQQMQQQ 1020 QQQQQHPEQQ QNQQQQQQGE GIASRCDVLT SGMVPLAYGG TLTAHGRLKP ALFFPELPLA 1080 YMSQDQQRMH LPLEQLRAAV AEAAAAGSLV PPTHASAADG AAAAAAAAGE GRGGRSAAAA 1140 HDAIQAQKCE RKDAMVRASA AVRSLASRVA SARGSSKHDK FAKARSHKAK KVRQSNLSKQ 1200 LAREKGGIGS EEEGPDYGEG YDDGFEEMDM LGGENANGE*

Sequence ? help Back to Top

Protein Sequence Length: 1240 aa Download sequence Send to blast

MSAEQPKDEG TVGVEKASPG NEVAKKASRT QMTPLQKEVL EASYTLNPFP PAEHKRSLGE  60
RIGLDEKQIS TWEDGPPLGW DFDELPQAAI EAGVGGKHRR SEPIASAGPA SKAPRTADQS  120
GTVHRGIPPL SSADKSRLRA EEREQKRLDA IKERERKNEE KKKEREDKKR EREMMRANER  180
QEKLLSKGKG VQAQAGPPDD LDLEWSRLLE VGTEVGTEVL MVAAFLNSFS DVLGMAPPPS  240
ADQIAQAVHD GQDSLLLGAI HISMLRLVQA DMEEAHASGA ASVSAAGPGS AGHHFDRAMI  300
SAAHMLEGCW GWGYDMDSWR AHLNALTWPE VLRQLAVVGT SGSPRQKQGR GRRPSNVHKA  360
KMGVEGEDVV EDEQGNLKLR LPNRLGIGTV KAASWQVLAE VGPEGLPIAE MAHRIHESGL  420
RDFKYTKQPE ATVAGALARD VLFTRVGPAQ YALSSIIKHK LNATSAQDGA GPEGKTEGMD  480
VDEHDGQRAN QQQGAPEGTE EGDSGGEDDD DEGGNEDRGG TGEGGRPGAS QPKAPWVGIL  540
AASDYDALNV GERLAALAWL IHTVCDSPTV RLLLDARVDQ AINDKKEIVE MGKEIKKKRL  600
EDAYVKSRAA ADVASKKMAE LQAVGGSLPG YPPPAAMPLN FDPQLAGAAS AAAQRAMEDA  660
AVAARLVSEV AKDDSEEEKL AHQRRMDALA RVDEETAIQL QPLGMDRRYN RYWRVAPVGC  720
DSGEVALGAQ DPGIGRVFVE AADGSSWRLI QQPEQLDGLS AALDPRGARE GGLAAALNRL  780
GPAIKRAMPS SPLTVDLRGA STSGPACPGA GPLQQHQQQH LARQLRFVRP QATLFPASAE  840
VKPLVGEPVR PSKLKEDVLR IGAALPEPAL HFDFDRAAWQ QAVLQASNPL ALRQCVGRLE  900
ASVVPDYLSA AYNRNPQILK AAWSSAQRQQ QEAEALVATS AEGAPSEADQ QLAMEEPLSW  960
LPPTYAAVAL RLQALDAALY FAPQTRCGRD RLAGYRYILR PAPVPRPTAL EQLRQQMQQQ  1020
QQQQQHPEQQ QNQQQQQQGE GIASRCDVLT SGMVPLAYGG TLTAHGRLKP ALFFPELPLA  1080
YMSQDQQRMH LPLEQLRAAV AEAAAAGSLV PPTHASAADG AAAAAAAAGE GRGGRSAAAA  1140
HDAIQAQKCE RKDAMVRASA AVRSLASRVA SARGSSKHDK FAKARSHKAK KVRQSNLSKQ  1200
LAREKGGIGS EEEGPDYGEG YDDGFEEMDM LGGENANGE*

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP5105	8	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	2e-34	homeobox-1

Link Out ? help Back to Top
Phytozome	Dusal.0301s00003.1.p