PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV53705.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family CAMTA
Protein Properties Length: 939aa    MW: 104743 Da    PI: 6.2812
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV53705.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-11612.2e-50121282117
        CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 
                 ++e ++rwlk+ e++ iL+nf + ++t+  ++rp sgsl+L+n+++++ frkDG+sw+k++d +t+ E+he+LKvg+v++l+cyYah+e+n++fqrr+y
  KZV53705.1  12 VHEaQTRWLKPVEVYFILKNFMENQITHRIPQRPASGSLFLFNKRVTKSFRKDGHSWRKRRDQRTIAEAHERLKVGTVDALNCYYAHGEHNHKFQRRSY 110
                 67779********************************************************************************************** PP

        CG-1 100 wlLeeelekivlvhylev 117
                 w+L+ ++e+ivlvhy+++
  KZV53705.1 111 WILDPNFEHIVLVHYRDT 128
                 ****************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143768.7978134IPR005559CG-1 DNA-binding domain
SMARTSM010763.8E-6011129IPR005559CG-1 DNA-binding domain
PfamPF038593.2E-4514127IPR005559CG-1 DNA-binding domain
SuperFamilySSF812964.4E-15371456IPR014756Immunoglobulin E-set
Gene3DG3DSA:2.60.40.102.9E-7371461IPR013783Immunoglobulin-like fold
PfamPF018334.1E-6371449IPR002909IPT domain
CDDcd001020.00506371456No hitNo description
Gene3DG3DSA:1.25.40.205.7E-15566660IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.122568660IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484032.18E-14571663IPR020683Ankyrin repeat-containing domain
CDDcd002041.16E-13573660No hitNo description
PfamPF127963.8E-7574661IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008810.766601633IPR002110Ankyrin repeat
SMARTSM002480.0011601630IPR002110Ankyrin repeat
SMARTSM000156.2718740IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.888719748IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525405.66E-6722823IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000153.3778800IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.023779808IPR000048IQ motif, EF-hand binding site
PfamPF006120.015781799IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0096801823IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.176803827IPR000048IQ motif, EF-hand binding site
PfamPF006125.1E-5804822IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 939 aa     Download sequence    Send to blast
METGGYDINH LVHEAQTRWL KPVEVYFILK NFMENQITHR IPQRPASGSL FLFNKRVTKS  60
FRKDGHSWRK RRDQRTIAEA HERLKVGTVD ALNCYYAHGE HNHKFQRRSY WILDPNFEHI  120
VLVHYRDTEV GRQSASTSQV SPLSSPSVGP QPSSLATRQP DSYVISGSHE LRANEQSPSS  180
VEISSSDVDW NQGLNELDIT GSKDEDYSSS GPELNYALQT IKHQLSLDDD ETQKFTLYLG  240
DEYSNDLEDV LKKFDSSPQI STDANNLLLQ QFSDEGIGKH HPHPGDDADL WDHIIDGSQS  300
LPSVESQAIG GHDFHNSSMA IPLEVESMDY LAHSPICDAY GTNSTLSSQD SLGINVQDYI  360
NLTIAPKQKF TIQEISPDWC YTSESAKIII IGSFLCEPSE CSWACMFGDI EVPIQIIRDG  420
VVCCHAPPQL QAGKVNICIT SGNRESCSEV REFVYRAEPI VCKHNNSPET EDGKSSDELL  480
LIARFVQMLL SDQSPEGDVP ETDFDLLAKY KTSEGMWSQV INALSFGTSS SASTLNWLLE  540
ELLKDKLGQW LSSRSQRKNQ KGCSLPKKEQ GIIHMAAGLG YEWALVPILN SGISANFRDS  600
SGWTALHWAA RFGREKVVAT LMASGASPGA ITDPTSQDPT GKTPASIAAD CGYTGLAGYL  660
SEMALTDHLS SLVMKETELS KGSAALESEK TIHSLSNTGP SFNEDQGALK DTLAAVRYAT  720
QAAALIQSAF RAHSFRKRQQ NEAAVAISGA YGDEYSILES DIKGLSAASK LAFHNARDYS  780
SAALSIQKKY RGWKGRKDYL SFRQKVVKIQ AHVRGHQARK KYNVSWAVGV LEKVILRWRR  840
RGVGFRGFRI DSETVHECHD DDILRVFRKK NVEAAIDEAV SRVLSMVESP TARQQYHRIL  900
EKYRQAKAEL QNGESHTSSD HHWLSSHLNF PNEENSEIY
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV53705.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011086818.10.0calmodulin-binding transcription activator 4
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A2Z7D3770.0A0A2Z7D377_9LAMI; Calmodulin-binding transcription activator 4-like
STRINGMigut.E00009.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39322037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]