PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV51057.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 346aa    MW: 38880.2 Da    PI: 7.8285
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV51057.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY107.95.1e-34196253259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK vk+s++prsYYrCt+++Cpvkk+vers +dp++v++tYeg+Hnh+
  KZV51057.1 196 EDGYRWRKYGQKAVKNSPYPRSYYRCTTPKCPVKKRVERSFQDPTIVVTTYEGQHNHH 253
                 8********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.0E-35180255IPR003657WRKY domain
SuperFamilySSF1182901.57E-29187255IPR003657WRKY domain
PROSITE profilePS5081132.305190255IPR003657WRKY domain
SMARTSM007744.5E-39195254IPR003657WRKY domain
PfamPF031064.5E-26196253IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MSEDLLRDEF YYHQTFHDDL RRNAGGATNF QYSNTTKNAT PPANNSTRAP NSFPADSSGH  60
QRQMLDPRWY LSSTLHGPDF DHNKLSAAGF GTSPLSSSAK EGLRALVVDN LQGLGEVETP  120
VTPNSSISAS STEVAPGEES DSKKNQKLDT DQAKEAAEEG ENMISSRDNK SKKKGEKKQK  180
EPRFAFMTKS EIDQLEDGYR WRKYGQKAVK NSPYPRSYYR CTTPKCPVKK RVERSFQDPT  240
IVVTTYEGQH NHHVPATLRG AAATGMFAPA GSILMTTPPF LQEQQRLLQM PYQLYMNNFS  300
GRNLVYDHHQ EQQLSLSTLI QDHDLHVSGH GLLQDIIPPA FPKREF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A9e-31185256778Probable WRKY transcription factor 4
2lex_A9e-31185256778Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00440DAPTransfer from AT4G18170Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV51057.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022879638.13e-93probable WRKY transcription factor 71
TrEMBLA0A2Z7CYH60.0A0A2Z7CYH6_9LAMI; WRKY transcription factor
STRINGXP_002519733.18e-70(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14852475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.12e-52WRKY DNA-binding protein 71