PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV35178.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 305aa    MW: 34246.8 Da    PI: 9.7743
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV35178.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-18107157256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p +   r r++lg+f+tae Aa a+++a+ kl+ge
  KZV35178.1 107 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTFDTAEAAAFAYDRAASKLRGE 157
                 59******9.**********954...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.58E-22106166No hitNo description
SMARTSM003801.1E-36107170IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.3E-31107165IPR001471AP2/ERF domain
PROSITE profilePS5103222.721107164IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-22107165IPR016177DNA-binding domain
PfamPF008472.2E-12108157IPR001471AP2/ERF domain
PRINTSPR003671.9E-10108119IPR001471AP2/ERF domain
PRINTSPR003671.9E-10130146IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MDKVEEKKPP LTFENEPNIG AVLSQLILTT DSSTFDSIFS FYQTTDTVFS HVFRPLGSSV  60
YKRQTDMLRK FANERRIMDS LPRNSLLNPI SKPGYVKTYF SPNKKKLYRG VRQRHWGKWV  120
AEIRLPQNRM RVWLGTFDTA EAAAFAYDRA ASKLRGEYAR LNFPNLLDPA GLGFEDFSRF  180
NALKNAVDNK IQAILLKAKK GKKTKKRGIK KETDHSSKCE SESAGAKKTG SFPNSVNAES  240
WNARVSVDGF WRDGGDGEDL EGGGSLSYEW GSAAAVPPGE LEIEGCPLPR TTSYDLELIW  300
EVLAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-19104164263ATERF1
3gcc_A6e-19104164263ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV35178.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101035.13e-97LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF061
TrEMBLA0A2Z7BNK40.0A0A2Z7BNK4_9LAMI; Uncharacterized protein
STRINGMigut.A00662.1.p2e-84(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36012345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.13e-34ERF family protein