PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV31513.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 301aa    MW: 33679 Da    PI: 8.5323
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV31513.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.7e-18103153256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr++  +g+WvAeIr p +   r r++lg+++tae Aa a++ a+ kl+ge
  KZV31513.1 103 LYRGVRQRQ-WGKWVAEIRLPQN---RMRVWLGTYDTAEVAAYAYDTAACKLRGE 153
                 59****999.**********954...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.51E-30102162No hitNo description
SMARTSM003801.1E-35103166IPR001471AP2/ERF domain
SuperFamilySSF541715.43E-22103161IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.4E-30103161IPR001471AP2/ERF domain
PROSITE profilePS5103222.893103160IPR001471AP2/ERF domain
PfamPF008473.0E-12104153IPR001471AP2/ERF domain
PRINTSPR003674.1E-10104115IPR001471AP2/ERF domain
PRINTSPR003674.1E-10126142IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MTSIQEINGP FTVENASKIG FSLSQIILTS NSNTLDSIFS YCQQANAPAL RPLIGSSVYS  60
AQTDLLQKFS DENISNPSFY SLTYPVRELG YPYTHFSPTK KKLYRGVRQR QWGKWVAEIR  120
LPQNRMRVWL GTYDTAEVAA YAYDTAACKL RGEYARLNFP NLRDPARLGL VDPARLKAVK  180
LAVDAKIQAI CQKLRRTKKS KNPAKRSELE SNNSHSSNDY CTGSEVVETK KTDSSPSSAV  240
NTESWGSNAR DDDPWKVDKS PVSFEWCSAV AAPLPELEIE GCSLARMPSY DPELIWEVLA  300
N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-18100160263ATERF1
3gcc_A3e-18100160263ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV31513.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101035.11e-111LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF061
SwissprotQ9C7W22e-56ERF61_ARATH; Ethylene-responsive transcription factor ERF061
TrEMBLA0A2Z7BAH90.0A0A2Z7BAH9_9LAMI; Uncharacterized protein
STRINGMigut.A00662.1.p1e-100(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36012345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.17e-55ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]