PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | orange1.1g046677m | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 203aa MW: 23526.7 Da PI: 7.7284 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21.4 | 5.6e-07 | 7 | 58 | 12 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 12 kNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 NR +A r +RKk +i Le k+ +L + ++L +l l+ e+ +l++e+ orange1.1g046677m 7 ANRMSAIRAKERKKLYIYMLEHKMHNLRSNSTTLTAQLTLLETESNSLDAEK 58 6**********************************************99875 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57959 | 1.41E-7 | 4 | 54 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.0E-7 | 4 | 54 | No hit | No description |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 203 aa Download sequence Send to blast |
MCHRIVANRM SAIRAKERKK LYIYMLEHKM HNLRSNSTTL TAQLTLLETE SNSLDAEKAV 60 LKHRLEITLQ KIHLQDSLND QIRSEIQHMK TVLGEKIPNL GALFGLSRKS SYQDMNAPIG 120 AVAQLLPELQ LQNSYLDQQP QYDFQQQPYL GLNNFGFQNE QGECSQLQQQ LLYQENPPPH 180 DHYQMQNEQA QARQLQQQQP RF* |
Expression -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed constitutively at a low level in young seedlings and in roots, stems and leaves of mature plants. |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_015382869.2 | 1e-143 | probable transcription factor PosF21 | ||||
Swissprot | Q04088 | 2e-22 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | V4UAJ4 | 2e-91 | V4UAJ4_9ROSI; Uncharacterized protein | ||||
STRING | XP_006447900.1 | 3e-92 | (Citrus clementina) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM23078 | 3 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G31370.6 | 1e-17 | bZIP family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | orange1.1g046677m |
Publications ? help Back to Top | |||
---|---|---|---|
|