PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID orange1.1g045277m
Common NameCISIN_1g045277mg
Organism
Citrus sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bZIP
Protein Properties Length: 336aa    MW: 37555 Da    PI: 9.3872
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
orange1.1g045277mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1383.6e-12267310548
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                        ++++r++kNRe+A rsR+RK+a++ +Le  v  L + N+ Lkk+
  orange1.1g045277m 267 RKQKRMIKNRESAARSRARKQAYTNQLESQVLWLRKRNSWLKKQ 310
                        689************************************99985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.3E-9263331IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.829265310IPR004827Basic-leucine zipper domain
CDDcd147071.69E-21267312No hitNo description
PfamPF001701.1E-10267310IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-11267311No hitNo description
SuperFamilySSF579591.5E-10267312No hitNo description
PROSITE patternPS000360270285IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MVSPNGGQGP PYNNLIYDHE VRSQMGNIGK PSLMSNHMNL NHELAMIKNV QTVSGDNQDG  60
VQIVQNPSSS SSSSSPPPSY FLGNINLNGR LSKKTIDQVW KDTVHHEHEV DHSNQSAVVQ  120
QQLTLGETTL EDFLLRAGVI NNCMGNNNNN NNNISNNNNH NGVAGNHHQP LISMGIDPMV  180
VVSQQADWLQ FQMASQQQQM GAMDTSYNVS ESVYENPVGD IGYSENQLAL SMPMPATSAA  240
PSELSKVNNV GRKRRYSDEI MEKTIERKQK RMIKNRESAA RSRARKQAYT NQLESQVLWL  300
RKRNSWLKKQ KEVDILFSSY PTPMSKYQLR RASSV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006434076.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A067GZF90.0A0A067GZF9_CITSI; Uncharacterized protein
STRINGXP_006434076.10.0(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17216911
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.14e-28ABA-responsive element binding protein 3