PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

orange1.1g039918m

Common Name

CISIN_1g039918mg

Organism

Citrus sinensis

Taxonomic ID

2711

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bZIP

Protein Properties

Length: 141aa MW: 16324.3 Da PI: 5.3591

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
orange1.1g039918m	genome	ICGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.1	6.9e-12	53	111	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ rr+++NRe+ArrsR RKk+++e L+e+ eN+ Lk+el+ ++++ l +e+ orange1.1g039918m 53 RKKRRMISNRESARRSRWRKKKQLEDLTEELNRSAVENQVLKNELNIVLNQCYLLWKEN 111 68899*****************************************9999999887776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	8.2E-10	49	104	No hit	No description
SMART	SM00338	4.2E-12	49	113	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.14	51	114	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.3E-11	53	108	No hit	No description
Pfam	PF00170	7.4E-9	53	111	IPR004827	Basic-leucine zipper domain
CDD	cd14702	3.87E-14	54	104	No hit	No description
PROSITE pattern	PS00036	0	56	71	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence Send to blast
MFLGEEAAAQ FQLPVLETGF TADDIQEWLS DLFQSNSGSS EGSTRAVYSD DERKKRRMIS 60 NRESARRSRW RKKKQLEDLT EELNRSAVEN QVLKNELNIV LNQCYLLWKE NEQLTSEYVA 120 LRTRLSNLYR ILGSMQTPSQ *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	54	73	KRRMISNRESARRSRWRKKK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006472331.1	2e-97	basic leucine zipper 4-like
TrEMBL	A0A067GRZ1	6e-97	A0A067GRZ1_CITSI; Uncharacterized protein
STRING	XP_006472331.1	6e-97	(Citrus sinensis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM12232	24	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49760.1	1e-22	basic leucine-zipper 5

Link Out ? help Back to Top
Phytozome	orange1.1g039918m