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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | orange1.1g037676m | ||||||||
Common Name | CISIN_1g037676mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bZIP | ||||||||
Protein Properties | Length: 268aa MW: 29647.5 Da PI: 7.4097 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.9 | 2.9e-15 | 201 | 251 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe + +L+aeN++Lk+ ++el+ + orange1.1g037676m 201 RRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERK 251 69*********************************************9865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.0E-11 | 197 | 261 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.634 | 199 | 251 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.13E-11 | 201 | 251 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.0E-14 | 201 | 251 | No hit | No description |
CDD | cd14707 | 4.77E-23 | 201 | 248 | No hit | No description |
Pfam | PF00170 | 1.1E-12 | 201 | 251 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 204 | 219 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence Send to blast |
MGNKLVVETA EQAATLTRQN SFSIPILLCK KTVEEVWSEI QKDQQPQRRC HVEPPQRQPT 60 FGEITLEEFL VKAGVVQEPA TKPCPQSHSP PIHRSNNDSN NNNNTCLGSA YGMGLGPSAC 120 TMMALGFSAT QPSMGSNLLV NGYAAYPIYT APTELVGQLA STDSNNGDDK EKSQGMMLEA 180 VGPKGNRKRI IDGPHEVVVE RRQRRMIKNR ESAARSRARK QAYTVELELE LTQLKAENDK 240 LKEAVKELER KRVQEDIQAT EDGKKED* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Csi.8508 | 0.0 | callus |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024035011.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X5 | ||||
TrEMBL | A0A067F3K2 | 0.0 | A0A067F3K2_CITSI; Uncharacterized protein | ||||
STRING | XP_006487955.1 | 0.0 | (Citrus sinensis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM11652 | 22 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36270.1 | 5e-43 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | orange1.1g037676m |