PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID orange1.1g011345m
Common NameCISIN_1g011345mg
Organism
Citrus sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bZIP
Protein Properties Length: 489aa    MW: 53409.1 Da    PI: 7.7507
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
orange1.1g011345mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.47.5e-09131193163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        eke +r  r   NRe+Ar   +R++a +eeL++k++ L++eN++Lk e e   ke+++l++ +
  orange1.1g011345m 131 EKEERRVCRILANRESARQTIRRRQALCEELTRKAADLSQENESLKREKELAVKEYQSLETIN 193
                        678888899999***********************************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.3E-6128193No hitNo description
PfamPF001702.5E-7131193IPR004827Basic-leucine zipper domain
SMARTSM003382.5E-11131195IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.576133196IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.78E-6135190No hitNo description
CDDcd147024.27E-13139187No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    Send to blast
MVDMELEAAE ALADLAHLAM IENGGGSGAA ETATIWGCKG KRVRKRVKTE SPPGQAGSAM  60
NPVDPEPPCS DPIDDQVISD QQRDQTACGN ILIKPAKADQ DAESLKRSSL CATRYISMAG  120
GRSRQNLTEA EKEERRVCRI LANRESARQT IRRRQALCEE LTRKAADLSQ ENESLKREKE  180
LAVKEYQSLE TINKHLKAQV AKVMKSEVGE TQGEVKLAHA EMSSSPTNCP LLLYNHHALT  240
PLGWPSIIQS SQPVPSRHEM QNAVTFPSNI STSITGKLAS SQEQENPTDS NVARTPLYVV  300
PCPWFFPLHD SGSGFHAPIS NGLKVLQDET SARNGYGSGS SSKMTADKEN HHFLLPVKIK  360
NEAYGLPEAQ SYNDLNDIPV TESPQDGGCQ QIGHYTREAT LTPPPLSSVG GSFIVKHDNV  420
LQSDYTGHTK AVSKIANHLV SHPEKKQEPV NYPSRKLVDA ATAAEARKRR KELTKLKNLH  480
GRQCGMQC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102107ESLKRS
2466471RKRRKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006430258.20.0uncharacterized protein LOC18040087 isoform X2
TrEMBLA0A067FCA60.0A0A067FCA6_CITSI; Uncharacterized protein
STRINGXP_006430258.10.0(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM112112428
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.16e-60bZIP family protein