PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_37342
Common NameKK1_038961
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 471aa    MW: 54634.4 Da    PI: 4.745
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_37342genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM127.31.3e-39101393127
            NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                    +G+ F+P+d+elv +yLk+k+ +++ ++ +vi+ +d+++v+Pw+ p      +++ ++ ew+fFs+ d ky++++r nr+tk g+Wk+tgk++++ 
  C.cajan_37342  10 VGLGFRPRDDELVGFYLKHKLLSDDPRV-QVIPVIDLCQVDPWHVPVmlaesAIRFNDPEWFFFSPVDFKYSNSRRFNRTTKCGFWKTTGKERDIR 104
                    799**********************999.99***************5355554445888************************************9 PP

            NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                    s  +++++g+kktLvfy+gr p+g++++Wv+hey+
  C.cajan_37342 105 SLdTNTVIGTKKTLVFYEGRVPRGVRSNWVIHEYH 139
                    9856778***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100544.9478158IPR003441NAC domain
SuperFamilySSF1019411.16E-449158IPR003441NAC domain
PfamPF023651.8E-2110139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MESRGYPDLV GLGFRPRDDE LVGFYLKHKL LSDDPRVQVI PVIDLCQVDP WHVPVMLAES  60
AIRFNDPEWF FFSPVDFKYS NSRRFNRTTK CGFWKTTGKE RDIRSLDTNT VIGTKKTLVF  120
YEGRVPRGVR SNWVIHEYHD ATFHQSQRTF VLCRLMKKPE KKTKGGTDTQ ICDEGESSRS  180
MVSDYENRQA TAEGIPSGST FTGVEIISQA TPQTESPTGV QHEEPSFSTY PFYNAYFRNE  240
NNVMQTPFET TEKDEFLMHT PFETTEKDEF LMQTPFETTT EDKFLIQTPF ETTEVNEFIN  300
SLLADENLVI DEESMHVFVN NSIQSESLRR VYCESSDTDA EVVSKLDDKI VDTSTMYNEY  360
SNLDQYHASK RFKSSHDVVY GDTWLQSSNN EANQEKEKSI FQDNFWGVET SSFDSTANKP  420
LEINCTEISS SPFTPRSWES QYHPRPNNFT SQKADEDLKR KRRFKTVQYP E
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-281115820165NO APICAL MERISTEM PROTEIN
1ut4_B4e-281115820165NO APICAL MERISTEM PROTEIN
1ut7_A4e-281115820165NO APICAL MERISTEM PROTEIN
1ut7_B4e-281115820165NO APICAL MERISTEM PROTEIN
3swm_A4e-281115823168NAC domain-containing protein 19
3swm_B4e-281115823168NAC domain-containing protein 19
3swm_C4e-281115823168NAC domain-containing protein 19
3swm_D4e-281115823168NAC domain-containing protein 19
3swp_A4e-281115823168NAC domain-containing protein 19
3swp_B4e-281115823168NAC domain-containing protein 19
3swp_C4e-281115823168NAC domain-containing protein 19
3swp_D4e-281115823168NAC domain-containing protein 19
4dul_A4e-281115820165NAC domain-containing protein 19
4dul_B4e-281115820165NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_37342
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029125096.10.0uncharacterized protein LOC109788497
TrEMBLA0A151RBG70.0A0A151RBG7_CAJCA; NAC domain-containing protein 69
STRINGGLYMA16G01930.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.21e-45NAC transcription factor-like 9