PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_27232
Common NameKK1_026669
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GATA
Protein Properties Length: 543aa    MW: 60313.4 Da    PI: 6.6702
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_27232genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.82.2e-16741135
           GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                   C++Cg+t+TplWR+gp  ++ LCnaCG ++r kg+
  C.cajan_27232  7 CHHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41
                   ****************88888***********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004011.9E-11160IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.71E-11546No hitNo description
CDDcd002022.06E-16655No hitNo description
PROSITE patternPS003440732IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.0E-12741IPR013088Zinc finger, NHR/GATA-type
PfamPF003203.7E-14741IPR000679Zinc finger, GATA-type
PROSITE profilePS5011411.121740IPR000679Zinc finger, GATA-type
PfamPF139192.7E-8282383IPR028020ASX homology domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    Send to blast
MGKQGPCHHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAENVDSEDQ  60
KVSRVKSISL NKNKEEKLVK RKQNYDNAAS GGFVPDYNQG YRKAVDEDTS NRSSSGSAVS  120
NSESCAQFGG TDASDLTGPA QSVVWDATVP SKKRTCAGRP KPSSVEKLTR DLCTILHEQR  180
SYFSASSEDD LLLESGTPMV SVEIGHGSIL IRHPSSIARD EESEASSLSV DNKQCLMNEA  240
YSCSGTIPMH CDRSGMNFSS HGIEKIRNSA GQGMQQEQRD RQDKSHLEKL QVPGNHDSPL  300
CVIDLNDVVN YEEFMRNLTN EERQQLLKYL PMVDTAKFPD SLKNMFNSFQ FKENLTYFQQ  360
LLWEGVFDIS MLGTKPEEWK TMKRLVLSNL SKSKWVEHYN FLKKYENKDG KAIDPGSTGM  420
ELSNVTNGKR LRECDGRNQN FPELKTAMRS PKRVIIKASS ESKEEVEEGS SFSPKSLFAL  480
PHGVSGLDML DSLNFVGESS EDLLLEVPSN SSFPQAELLH PTFCYGAQVS TTSSSVHSPN  540
THP
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_27232
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150341e-152AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020231249.10.0GATA transcription factor 26 isoform X2
SwissprotQ8W4H11e-140GAT26_ARATH; GATA transcription factor 26
TrEMBLA0A151S9Q80.0A0A151S9Q8_CAJCA; GATA transcription factor 28
STRINGGLYMA05G05320.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF44243155
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.31e-132GATA transcription factor 26