PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_24047
Common NameKK1_025409
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 207aa    MW: 23451.5 Da    PI: 6.4008
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_24047genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.77.8e-201868155
            AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   s y+GVr++k +g+Wv+eIr+p   gk+ r++lg++ t+e+Aa+a++ a++ l+g
  C.cajan_24047 18 SSYRGVRQRK-WGKWVSEIREP---GKKSRIWLGSYETPEMAAAAYDVAALHLRG 68
                   67*******9.**********8...557*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541717.85E-231877IPR016177DNA-binding domain
CDDcd000186.90E-231878No hitNo description
PfamPF008472.9E-131868IPR001471AP2/ERF domain
PROSITE profilePS5103223.4721976IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-321977IPR001471AP2/ERF domain
SMARTSM003802.6E-381982IPR001471AP2/ERF domain
PRINTSPR003676.6E-132031IPR001471AP2/ERF domain
PRINTSPR003676.6E-135878IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MEQTTTTMQE HVIAPTSSSY RGVRQRKWGK WVSEIREPGK KSRIWLGSYE TPEMAAAAYD  60
VAALHLRGRA ARLNFPELVE TLPRPKSSKS EDVQVAAQEA ALRFRRTPMM SSSSSSSSMS  120
DQECRNDIKG GVVPVRVGLS PTQIQAINES PLDSPKMWMM HMADALRFGF DDDSMMMTHH  180
GHNYALELSG WEEIQHEYTL WDSPEYV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-172081668ATERF1
3gcc_A2e-172081668ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_24047
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020230149.11e-154ethylene-responsive transcription factor ERF022
SwissprotQ9C9I22e-52ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A151SD081e-153A0A151SD08_CAJCA; Ethylene-responsive transcription factor ERF021 family
STRINGGLYMA01G44130.11e-89(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.12e-42ERF family protein