PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_24044
Common NameKK1_025406
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 177aa    MW: 19796.2 Da    PI: 5.6341
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_24044genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-181665255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+GVr +k +g+Wv+eIr+p   g ++r++lg+f t+e+Aa+a++ a++ ++g
  C.cajan_24044 16 AYRGVRKRK-WGKWVSEIREP---GTKTRIWLGSFETPEMAAAAYDVAALHFRG 65
                   69****999.**********8...325***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541718.5E-231574IPR016177DNA-binding domain
SMARTSM003802.5E-371679IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.0E-321674IPR001471AP2/ERF domain
PfamPF008476.6E-121665IPR001471AP2/ERF domain
PROSITE profilePS5103223.8811673IPR001471AP2/ERF domain
CDDcd000189.04E-241775No hitNo description
PRINTSPR003673.5E-101728IPR001471AP2/ERF domain
PRINTSPR003673.5E-103955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MDMPCSSSSS GAASSAYRGV RKRKWGKWVS EIREPGTKTR IWLGSFETPE MAAAAYDVAA  60
LHFRGRDARL NFPELATTLP RPLTNNADHI RMAAHEAALR LRTNPAPPQS SASAPPLTVR  120
LSPTQIQAIN DSPMDSPTWM QMPDTFMMHD QSIIFSNGYS FEDNEWEDIQ NDSLWDP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-161273163ATERF1
3gcc_A9e-161273163ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAPTransfer from AT1G71450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_24044
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020230017.11e-129ethylene-responsive transcription factor ERF021
SwissprotQ9C9I25e-62ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A151SCX01e-128A0A151SCX0_CAJCA; Ethylene-responsive transcription factor ERF021 family
STRINGGLYMA11G01640.11e-105(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.12e-60ERF family protein