PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_22663
Common NameKK1_023332
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HD-ZIP
Protein Properties Length: 204aa    MW: 23176.5 Da    PI: 8.3198
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_22663genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.11.7e-1964118256
                    T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
       Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                    rk+ ++tk+q + Lee F++n++++ +++e LA+kl+L  rqV vWFqNrRa+ k
  C.cajan_22663  64 RKKLRLTKDQSRLLEENFKQNHTLNPKQKETLAMKLKLRPRQVEVWFQNRRARSK 118
                    78889************************************************98 PP
2HD-ZIP_I/II117.67.2e-3864152189
    HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 
                    +kk+rl+k+q++lLEe+F+++++L+p++K++la +L+l+prqv+vWFqnrRAR k+kq+E+++e+Lkr++ +l+e+n+rL+keveeLr+
  C.cajan_22663  64 RKKLRLTKDQSRLLEENFKQNHTLNPKQKETLAMKLKLRPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGTLTEQNRRLQKEVEELRA 152
                    69*************************************************************************************94 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.1E-1847118IPR009057Homeodomain-like
SuperFamilySSF466892.76E-1950121IPR009057Homeodomain-like
PROSITE profilePS5007117.31360120IPR001356Homeobox domain
SMARTSM003894.0E-1762124IPR001356Homeobox domain
CDDcd000868.97E-1763121No hitNo description
PfamPF000466.5E-1764118IPR001356Homeobox domain
PROSITE patternPS00027095118IPR017970Homeobox, conserved site
SMARTSM003402.7E-22120163IPR003106Leucine zipper, homeobox-associated
PfamPF021834.3E-10120154IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MAVLPSSISS LELTISVPGF GSSSTFVPSP SVKELDINQV PLEEDWMAPN VEDEDESSNG  60
DPPRKKLRLT KDQSRLLEEN FKQNHTLNPK QKETLAMKLK LRPRQVEVWF QNRRARSKLK  120
QTEMECEYLK RWFGTLTEQN RRLQKEVEEL RAMKVGPPTV ISPHYSYPLP ASTLTMCPRC  180
ERVTTTTVVA TTTIADTVLP SATC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112120RRARSKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}.
UniProtProbable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_22663
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020222921.11e-149homeobox-leucine zipper protein HOX3
RefseqXP_020222922.11e-149homeobox-leucine zipper protein HOX3
SwissprotQ0JKX11e-78HOX3_ORYSJ; Homeobox-leucine zipper protein HOX3
SwissprotQ9XH381e-78HOX3_ORYSI; Homeobox-leucine zipper protein HOX3
TrEMBLA0A151T1H11e-148A0A151T1H1_CAJCA; Homeobox-leucine zipper protein HOX3
STRINGGLYMA20G01770.11e-115(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF95063040
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01430.11e-75homeobox-leucine zipper protein 17