PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_19195
Common NameKK1_019752
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 320aa    MW: 36606.2 Da    PI: 5.4633
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_19195genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM148.14.5e-4611331128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgk..rknratksgyWkatgkdkev 92 
                    +p+GfrFhPtdeelv +yLk+k+ g++ ++++vi+e+d++k+ePw Lp  +kvk++++ew+fFs+   k ++++  + nr+tk+g+Wk tgkd+e+
  C.cajan_19195   1 MPVGFRFHPTDEELVGHYLKHKLLGNHSTVHNVIAEIDVCKFEPWGLPafSKVKSDDQEWFFFSPLGLKFTKDRrkKCNRKTKAGFWKPTGKDREI 96 
                    699***************************99****************54499999*********999988755115689**************** PP

            NAM  93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +s+ +++++g+kktLvfykgr++++ +t+Wv+hey++
  C.cajan_19195  97 KSRgSKNVIGTKKTLVFYKGRSSDALRTKWVIHEYHA 133
                    **966777***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.02E-481151IPR003441NAC domain
PROSITE profilePS5100550.3661151IPR003441NAC domain
PfamPF023656.0E-262132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MPVGFRFHPT DEELVGHYLK HKLLGNHSTV HNVIAEIDVC KFEPWGLPAF SKVKSDDQEW  60
FFFSPLGLKF TKDRRKKCNR KTKAGFWKPT GKDREIKSRG SKNVIGTKKT LVFYKGRSSD  120
ALRTKWVIHE YHAVTFPQDK RDFVLCRLMN KAEKKAETET DKLIHGEGDS SNHIVADFEN  180
QETDDKIPNV YTLPEVNLES IFPAPPQAEE YELPSIQQST ICIEQESSSR GSSFPSAYIG  240
EKNNTMHIQM ETIEEEDHLD NIYIDKFLNE ILVGEDAFNT NETIPAFGIE TITALKEAYY  300
ESKETDGEPL SAQVKIIPLE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-32115115168Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_19195
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020221262.10.0NAC domain-containing protein 69
TrEMBLA0A151U8J70.0A0A151U8J7_CAJCA; NAC domain-containing protein 69
STRINGAES844642e-86(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.35e-49NAC transcription factor-like 9