PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_17016
Common NameKK1_017521
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 343aa    MW: 38443 Da    PI: 9.4189
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_17016genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1713.8e-53151421128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                    lppGfrFhPtdeelvv+yLk+k+++ +l++  +i++vd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++ 
  C.cajan_17016  15 LPPGFRFHPTDEELVVHYLKRKANSVPLPV-AIIADVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAASSGYWKATGTDKPILTSn 109
                    79****************************.88***************8888999*************************************9986 PP

            NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    ++++vg+kk Lvfy g+ pkg+kt+W+mheyrl
  C.cajan_17016 110 GHHKVGVKKALVFYGGKPPKGVKTSWIMHEYRL 142
                    7778***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.07E-648179IPR003441NAC domain
PROSITE profilePS5100561.38515179IPR003441NAC domain
PfamPF023655.1E-2816142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MDSSSGSESQ QHPQLPPGFR FHPTDEELVV HYLKRKANSV PLPVAIIADV DLYKFDPWEL  60
PSKATFGEQE WYFFSPRDRK YPNGARPNRA ASSGYWKATG TDKPILTSNG HHKVGVKKAL  120
VFYGGKPPKG VKTSWIMHEY RLLGNSSNPS SLLPSDHAHS NKKTSLRLDD WVLCRIYKKS  180
NSTILPRLPS MIEQNKEAST ESTMLPMMST LSMANNNTPQ NSNPTSSRSA SYGHQLALDQ  240
NDDNFFDGIL GVDQSMQQHV SDAKGNFPVK RAHEFWNDTG SSSSSRLRRF HCDLNTVEEN  300
SSFVSLLSHL PQNTTFHPNA LLGPVGTGVL RQQQFQLPSM NWN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-721518317169NO APICAL MERISTEM PROTEIN
1ut4_B1e-721518317169NO APICAL MERISTEM PROTEIN
1ut7_A1e-721518317169NO APICAL MERISTEM PROTEIN
1ut7_B1e-721518317169NO APICAL MERISTEM PROTEIN
3swm_A1e-721518320172NAC domain-containing protein 19
3swm_B1e-721518320172NAC domain-containing protein 19
3swm_C1e-721518320172NAC domain-containing protein 19
3swm_D1e-721518320172NAC domain-containing protein 19
3swp_A1e-721518320172NAC domain-containing protein 19
3swp_B1e-721518320172NAC domain-containing protein 19
3swp_C1e-721518320172NAC domain-containing protein 19
3swp_D1e-721518320172NAC domain-containing protein 19
3ulx_A1e-7211821171Stress-induced transcription factor NAC1
4dul_A1e-721518317169NAC domain-containing protein 19
4dul_B1e-721518317169NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_17016
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150385e-85AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020221384.10.0NAC transcription factor 25
SwissprotQ8GY421e-107NAC25_ARATH; NAC transcription factor 25
TrEMBLA0A151T7D20.0A0A151T7D2_CAJCA; NAC domain-containing protein 18
STRINGXP_007148205.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16233498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.11e-105NAC domain containing protein 25