PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_13048
Common NameKK1_013452
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GATA
Protein Properties Length: 537aa    MW: 59529 Da    PI: 7.0844
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_13048genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.94.3e-16842135
           GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                   C +Cg+t+TplWR+gp  ++ LCnaCG ++r kg+
  C.cajan_13048  8 CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 42
                   ****************88888***********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004015.4E-10256IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.81E-11446No hitNo description
CDDcd002022.89E-16754No hitNo description
PROSITE profilePS5011411.2841IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.102.3E-12842IPR013088Zinc finger, NHR/GATA-type
PfamPF003207.0E-14842IPR000679Zinc finger, GATA-type
PROSITE patternPS003440833IPR000679Zinc finger, GATA-type
PfamPF139191.2E-12272362IPR028020ASX homology domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    Send to blast
DMGKQGPCYH CGVTSTPLWR NGPPEKPVLC NACGSRWRTK GTLANYTPLH ARAETDVCED  60
QRVSRVKNIL LNKKKELPLL KRKRNHDNVI SRAPDYNQGF QKVVDEDTSN RSSSGSAISN  120
SESCVQIGHG GTDASDMTGP VQSVVWDATV PSKKRTCVGR PKPSSVEKLT KDLCTILHEQ  180
QSYFSASSED DLLFECETPM VSVEIGHGSV LIRHPSYIAP EEESEASSLS VDNKQCPMSE  240
AYSYFGAILM HNDSSHMKSS TVEVEKIKNS TVKSDKSQHE RVQILGNHES PLCSIDLNDV  300
VNYEEFLRIM TNEEQQQLLK LLPVVDTAKH PDSLKFMFNS SQFKENLTYF QQLLAEGVFD  360
ISLLGAKPED CKTLKRLALS NLSKSKWVEH YNFLKKCKNK VGKSTGTAST NVVNNKASTN  420
VVNIKRTRDS RNQNFPEFKT IMRSPKSVIT KVGYEGREAV EDGACYSAKS LFALPPDANS  480
LMLDSLNFVD ESTDQDLLLE VPSNTSFPQA ELLHPTLSLG AQASTSSSSV YSHLGHH
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_13048
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150431e-142AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020217403.10.0GATA transcription factor 26
SwissprotQ8W4H11e-150GAT26_ARATH; GATA transcription factor 26
TrEMBLA0A151TJD10.0A0A151TJD1_CAJCA; GATA transcription factor 28 (Fragment)
STRINGGLYMA11G04060.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF44243155
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.31e-142GATA transcription factor 26