PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_09117
Common NameKK1_009376
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 343aa    MW: 37823.7 Da    PI: 8.9899
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_09117genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM176.85.9e-55101371128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                    lppGfrFhPtdeelv++yL +k++++ ++  ++i++vd++k+ePw+Lp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke+l++ 
  C.cajan_09117  10 LPPGFRFHPTDEELVTCYLLNKISDSGFTG-KAITDVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSa 104
                    79*************************999.88***************99999****************************************987 PP

            NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    ++el+g+kktLvfykgrap+gek++Wvmheyr+
  C.cajan_09117 105 NSELIGMKKTLVFYKGRAPRGEKSNWVMHEYRI 137
                    8999***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-638159IPR003441NAC domain
PROSITE profilePS5100560.75510159IPR003441NAC domain
PfamPF023652.1E-2811137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MEGRGNDETL PPGFRFHPTD EELVTCYLLN KISDSGFTGK AITDVDLNKC EPWELPGKAK  60
MGEKEWYFFS LRDRKYPTGV RTNRATNTGY WKTTGKDKEI LNSANSELIG MKKTLVFYKG  120
RAPRGEKSNW VMHEYRIHSK STYRTNRQDE WVVCRVFKKS GGAKKYPSSN HARSVNPYSL  180
EIGPNNFMAP QMMQLGDPAA HFLYGRNHNH MSTTVELAEL ARVLRGGGAT SSVNVPMQPH  240
LSYPTLSAAA ASAAGGGFTI SGLNLNLGGA IATTQPILPL SPPPVHTMAQ PLDVNSSMIT  300
STSLGAENVA AGYGSEMSNI NSHGNRFMGM EHCMDLDNYW PSY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A7e-56916519174NAC domain-containing protein 19
3swm_B7e-56916519174NAC domain-containing protein 19
3swm_C7e-56916519174NAC domain-containing protein 19
3swm_D7e-56916519174NAC domain-containing protein 19
3swp_A7e-56916519174NAC domain-containing protein 19
3swp_B7e-56916519174NAC domain-containing protein 19
3swp_C7e-56916519174NAC domain-containing protein 19
3swp_D7e-56916519174NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_09117
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150358e-84AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029126727.10.0NAC domain-containing protein 45 isoform X1
RefseqXP_029126728.10.0NAC domain-containing protein 45 isoform X1
TrEMBLA0A151TSX10.0A0A151TSX1_CAJCA; Protein CUP-SHAPED COTYLEDON 2
STRINGGLYMA04G08320.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50733253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.21e-114NAC domain containing protein 38