PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_01658
Common NameKK1_001696
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 282aa    MW: 32082 Da    PI: 6.0065
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_01658genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.1e-20135186256
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                    +y+GVr+++ +g+++AeIrdp+++g   r++lg+f+ta +Aaka+++a+ +l+g+
  C.cajan_01658 135 HYRGVRQRP-WGKFAAEIRDPNKRG--SRVWLGTFDTAIDAAKAYDRAAFRLRGA 186
                    8********.**********96655..**************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.6E-32134194IPR001471AP2/ERF domain
CDDcd000182.45E-31134193No hitNo description
SMARTSM003808.5E-37135199IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-22135195IPR016177DNA-binding domain
PfamPF008479.0E-14135185IPR001471AP2/ERF domain
PROSITE profilePS5103224.012135193IPR001471AP2/ERF domain
PRINTSPR003671.9E-13136147IPR001471AP2/ERF domain
PRINTSPR003671.9E-13175195IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MANPDEVSAL NRIKLHLLGE LSPLSTPQTK QNHQQQPWFE LHEANPSPSQ SSNSDSSVSF  60
NHYFTETQFP LFEFDSKPEV IDLETPKSLN STSNQEKKGQ LSRKPSLQIS LPKKTEWIQF  120
GNPEEPPPPP PEKKHYRGVR QRPWGKFAAE IRDPNKRGSR VWLGTFDTAI DAAKAYDRAA  180
FRLRGAKAIL NFPLEVSAAA EEAGDERKRR REEEEEAEVE EVKAVVVKKE RTTTEHDVNC  240
FREMPLTPSM WTGFWDSDVK EIFNVPPLSP LSPFGFSPLM VV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-32134199469ATERF1
3gcc_A7e-32134199469ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1206210RKRRR
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:9756931}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00549DAPTransfer from AT5G47230Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_01658
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Ethylene induction is completely dependent on a functional ETHYLENE-INSENSITIVE2 (EIN2). Wounding as well as cold stress induction does not require EIN2. Transcripts accumulate strongly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by jasmonate, Alternaria brassicicola, exogenous abscisic acid (ABA), cold, heat, NaCl or drought stress. {ECO:0000269|PubMed:10715325}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020227044.10.0ethylene-responsive transcription factor 5
SwissprotO803412e-67EF102_ARATH; Ethylene-responsive transcription factor 5
TrEMBLA0A151SKV70.0A0A151SKV7_CAJCA; Ethylene-responsive transcription factor 5
STRINGGLYMA05G05130.11e-119(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108534109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.13e-46ethylene responsive element binding factor 5
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]