PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004515546.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 197aa    MW: 21722.3 Da    PI: 10.6401
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004515546.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.4e-2067115355
             AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g
  XP_004515546.1  67 YRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRG 115
                     9*******.**********32....25*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.6E-3266129IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-2966123IPR001471AP2/ERF domain
PROSITE profilePS5103222.66966123IPR001471AP2/ERF domain
SuperFamilySSF541716.41E-2266123IPR016177DNA-binding domain
CDDcd000182.43E-1567124No hitNo description
PRINTSPR003676.6E-116778IPR001471AP2/ERF domain
PfamPF008472.9E-1467115IPR001471AP2/ERF domain
PRINTSPR003676.6E-1189105IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MNIEMFSYDP TTTTTLNLPN HNQTTLEGIA AVVGEHVLYG PHHTTKTTPT ISVSNTENKT  60
QTTNKAYRGV RKRPWGRWSA EIRDRIGRCR HWLGTFDTAE EAARAYDAAA RRLRGSKART  120
NFKIPSVFPI PLSPTSASSS SSSDTVVKNR NKFNGGRKCC VVTSVEQLFS GVPEVRRERD  180
NNGNVGFGGT TTTGMVM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A7e-1865124161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A3e-17671221571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004515546.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004515546.11e-145ethylene-responsive transcription factor ERF084
SwissprotQ9M8M52e-27ERF84_ARATH; Ethylene-responsive transcription factor ERF084
TrEMBLA0A1S2Z5Q61e-144A0A1S2Z5Q6_CICAR; ethylene-responsive transcription factor ERF084
STRINGXP_004515546.11e-145(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130232631
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.11e-27ERF family protein