PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA03g24070
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YC
Protein Properties Length: 57aa    MW: 6811.76 Da    PI: 4.4352
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA03g24070genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC383.5e-1214556100
       NF-YC  56 leltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprde 100
                 +e+ + sw h e++k rtl+k+di+ a+  +dif f+ divp  e
  CA03g24070   1 MEFNVHSWFHVENKKYRTLQKNDISGAIRWSDIFYFICDIVPIYE 45 
                 68899************************************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.20.104.2E-6642IPR009072Histone-fold
SuperFamilySSF471135.58E-6651IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 57 aa     Download sequence    Send to blast
MEFNVHSWFH VENKKYRTLQ KNDISGAIRW SDIFYFICDI VPIYEINEEA MVVELE*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016566807.14e-19PREDICTED: nuclear transcription factor Y subunit C-4-like
TrEMBLA0A2G3A0Y51e-33A0A2G3A0Y5_CAPAN; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.19e-16nuclear factor Y, subunit C1