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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_013619458.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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| Family |
TCP |
| Protein Properties |
Length: 336aa MW: 38130.6 Da PI: 8.0222 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_013619458.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 136.5 | 2.2e-42 | 104 | 225 | 3 | 133 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaaks 97
+k+drhski+T++g+RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL+ ++k++ik+ ++ + s ++e+ ++s++ + +++k
XP_013619458.1 104 KKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLISKSKASIKQVKESAAASG---NHEHLQVSDN------VNDETQKV 189
699************************************************************55554...2222233222......11222244 PP
TCP 98 kksqksaasalnlakesrakarararertrekmrik 133
+k +++ + ++k+sr+kar+rarert km+++
XP_013619458.1 190 SKGRTKRVDDSCKKKQSREKARERARERTMTKMKMR 225
444444444467888*******************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MFPSIDTNGH DLFDPFNLHE ATMFPSFTTH ILSPSSHHHY PFPSFPSSSD FLDESVLISQ 60
FLLQQQADVD SPRKLCKELE QEKKNEEWVD GTTTEKVSPR RTGKKRDRHS KICTAQGPRD 120
RRMRLSLQIA RKFFDLQDML GFDKASKTIE WLISKSKASI KQVKESAAAS GNHEHLQVSD 180
NVNDETQKVS KGRTKRVDDS CKKKQSREKA RERARERTMT KMKMRLSGPI DTSKTFADPN 240
QESRKTKITG GAQVEGENLE QERSIIEKFL GLTSESSSST IFGDSEESYT SLGSIRETVS 300
TAGMVIPREH NTTSTASVDE ERNPISTFSL YDYLCY
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Detected in axillary mersitems which appears in the axils of leaves after flowering. During bud vegetative development, down-regulated in the outer layers of the meristem, but accumulates transiently in young leaf primordia. In buds bearing flowers, restricted to the provascular tissue underlying the bud. Accumulates in axillary buds, but disappears at the time of bud outgrowth. {ECO:0000269|PubMed:17307924}. |
| Uniprot | TISSUE SPECIFICITY: Expressed in axillary buds, and, to a lower extent, in axillary structures such as flowers and siliques. {ECO:0000269|PubMed:17307924}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that prevents axillary bud outgrowth. May also delay early axillary bud development. Probably involved in the auxin-induced control of apical dominance. {ECO:0000269|PubMed:17307924}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed transiently after shoot apical meristem (SAM) decapitation (release from apical dominance). {ECO:0000269|PubMed:17307924}. |
