PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.U2LLP
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ZF-HD
Protein Properties Length: 69aa    MW: 7436.51 Da    PI: 9.5456
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.U2LLPgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer85.17.6e-27653957
  ZF-HD_dimer  9 ClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                    NhAa+ Gg+avDGC+Efm+s  +egt+ al+CaACgCHRnFHRr++
  Araip.U2LLP  6 VVMNHAANSGGYAVDGCREFMAS-AAEGTTGALTCAACGCHRNFHRRKE 53
                 567*******************9.8889*******************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5152320.811352IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047704.7E-25653IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015666.4E-22852IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257742.0E-15952IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    Send to blast
MKKRQVVMNH AANSGGYAVD GCREFMASAA EGTTGALTCA ACGCHRNFHR RKELAAPSRD  60
LTFKAVINH
Functional Description ? help Back to Top
Source Description
UniProtInhibits zinc finger homeodomain (ZHD) transcription factors, such as ZHD5, by interacting with them to prevent both their nuclear localization and their DNA-binding properties. Involved in integrating signals from multiple hormones by preventing the expression of genes involved in gibberellic acid (GA), auxin and brassinosteroid signaling and by promoting the expression of abscisic acid (ABA)-responsive genes. Regulates several development aspects, including photomorphogenesis, apical dominance, longevity, flower morphology and fertility, as well as root and stem elongation. Promotes the formation of ectopic shoot meristems on leaf margins. {ECO:0000269|PubMed:16412086, ECO:0000269|PubMed:21059647, ECO:0000269|PubMed:21455630}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.U2LLP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020979384.12e-39mini zinc finger protein 3 isoform X1
RefseqXP_025629340.12e-39mini zinc finger protein 3 isoform X1
SwissprotQ9CA513e-20MIF1_ARATH; Mini zinc finger protein 1
TrEMBLA0A445AZU45e-30A0A445AZU4_ARAHY; Uncharacterized protein
TrEMBLA0A445AZX67e-30A0A445AZX6_ARAHY; Uncharacterized protein
STRINGEOY218442e-22(Theobroma cacao)
STRINGAES699101e-22(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2903722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74660.11e-22mini zinc finger 1