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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.NU0ET | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | ERF | ||||||||
Protein Properties | Length: 371aa MW: 41314.7 Da PI: 6.877 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.1 | 9.1e-18 | 41 | 91 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +gr++AeIrdp + r +lg+f+taeeAa a++ a+++++g+ Aradu.NU0ET 41 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRGH 91 59*******.**********93....35999***********************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 2.7E-34 | 41 | 104 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.4E-29 | 41 | 98 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.4E-11 | 41 | 91 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.42E-21 | 41 | 99 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 22.51 | 41 | 98 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 6.65E-30 | 41 | 100 | No hit | No description |
PRINTS | PR00367 | 2.1E-9 | 42 | 53 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.1E-9 | 64 | 80 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence Send to blast |
MDEALRRLNG MPLLSKPPPN NPRTKQTLRD TSTASTAGPM RYRGVRRRPW GRYAAEIRDP 60 QSKERRWLGT FDTAEEAACA YDCAARAMRG HKATTNFAYH TLPSYPSSIT ITSNHNNLLN 120 CHNHLFTHNQ FSFPYHHNQL FNGHNRHFGV WSEPFSASTF QEQRNLDSIN MLLHRDLIGS 180 SSSDNLSYNM GSFVNSHPGN VPNNNYSPPC SDTSNLGCGG GSKIDNTNNN EADGGDEEDS 240 KEQFYEGSGS SGLLEEIVKG FLKKKPKLNK CERLLGTRTT ASDGSCHSSF PPPPPPPPPP 300 PTPLLVFGES KIDEGFGVHL DQQGFQYMQQ LGGGFDNDFS NMVMLPNIPL QETNNQIMTT 360 MMMNNDNNQQ N |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 9e-20 | 41 | 97 | 14 | 71 | Ethylene-responsive transcription factor ERF096 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.NU0ET |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016184938.1 | 0.0 | ethylene-responsive transcription factor ESR2-like | ||||
Refseq | XP_025635223.1 | 0.0 | ethylene-responsive transcription factor ESR2-like | ||||
TrEMBL | A0A445AC41 | 0.0 | A0A445AC41_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4100 | 32 | 56 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13910.1 | 2e-11 | ERF family protein |