PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.F4DAN
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WOX
Protein Properties Length: 292aa    MW: 33027 Da    PI: 9.0344
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.F4DANgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox672.5e-21135194357
                  --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                  +R+++t+eq+ +Le l++   r+p+a+++e+++++l    +++ ++V++WFqN++a+e++
  Aradu.F4DAN 135 TRWNPTQEQIGILEMLYRGgMRTPNAQQIEQITAQLgkygKIEGKNVFYWFQNHKARERQ 194
                  7*****************99**************************************97 PP
2Wus_type_Homeobox117.84.8e-38135196465
  Wus_type_Homeobox   4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        tRW+Pt+eQi iLe+ly+ G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerqkq
        Aradu.F4DAN 135 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQ 196
                        8***********************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.187130195IPR001356Homeobox domain
SMARTSM003891.2E-7132199IPR001356Homeobox domain
SuperFamilySSF466891.75E-12132200IPR009057Homeodomain-like
CDDcd000866.47E-5135196No hitNo description
PfamPF000464.9E-19135194IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.607.5E-8136194IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0007165Biological Processsignal transduction
GO:0010067Biological Processprocambium histogenesis
GO:0051301Biological Processcell division
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MKVHQFTRGL WEHEPSLTLG CKRLRPLAPK LSTSSSSNNN NNNSPSSSSS LASFDLKSFI  60
RPEISKLGSS SSSDDDNNIN NNNNIIKRDP PSSSPPGSQV HNLFFFLFFN LFIFLLIQLL  120
FLHDMYLVET HPGGTRWNPT QEQIGILEML YRGGMRTPNA QQIEQITAQL GKYGKIEGKN  180
VFYWFQNHKA RERQKQKRNS LGLSHTPRTP AAVAVAAATT TIVSSPTFAA SLSFETSRGE  240
VIERDHEDSP YKKCRSWVFE YMEDQSWSSS SSSSKEEEHK TLELFPLHPE GR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.F4DAN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015972582.11e-134WUSCHEL-related homeobox 4
TrEMBLA0A444YWE91e-128A0A444YWE9_ARAHY; Uncharacterized protein
STRINGXP_004499043.11e-109(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61323452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46480.12e-62WUSCHEL related homeobox 4