PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.BU38Q
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HD-ZIP
Protein Properties Length: 747aa    MW: 82664.1 Da    PI: 5.6381
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.BU38QgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox148.6e-052859536
                 SS--HHHHHHHHHHHHHSSS--HHHHHHHHHH CS
     Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkk 36
                  ++t+ q+  Le++   +++p++++r++LA++
  Aradu.BU38Q 28 KRLTSAQTAKLEKYIIDCPHPDEAQRRQLAEE 59
                 6799**************************86 PP
2START1234e-392444691205
                  HHHHHHHHHHHHHHHHC-TT-EEEE.......EXCCTTE...EEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEE CS
        START   1 elaeeaaqelvkkalaeepgWvkss.......esengde...vlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetla....kaetlev 84 
                  e+a +a++el++++ ++ep+Wv s+        +e +++   ++++f ++++ ++e +++sg+v     +lv  +ld+  +W + ++    ka+tlev
  Aradu.BU38Q 244 EVAATAMDELLRLIRLNEPFWVGSAfdgklvlHGESYEKmfpRVYQFNDGNS-RVESSKESGIVNISGIQLVDLFLDSE-KWANAFPtivtKAQTLEV 339
                  58899********************999999955555541224667777777.****************9999999999.****************** PP

                  ECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCE.EEEEEEE-EE--S CS
        START  85 issg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksngh.skvtwvehvdlkg 174
                   + g      galqlm+ e+   splv+ R+f f+R++ ql+ g+w+i dvS ds ++ p   +  R+ ++pSg+li++++n   + vtw+ehv++++
  Aradu.BU38Q 340 FEIGlpesrsGALQLMYEEMHGFSPLVAsREFQFLRHCHQLEPGSWIITDVSFDSLRNYPFRLPRSRSWRRPSGCLIQELPNSTsCMVTWIEHVEVDD 437
                  ***********************************************************9999999******************999*********** PP

                  SXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
        START 175 rlp.hwllrslvksglaegaktwvatlqrqce 205
                  ++  h l+r lv++ +a ga++w   lqr c 
  Aradu.BU38Q 438 KIQtHRLYRDLVSTNAAYGAQRWIMELQRMCL 469
                  *999************************9996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.9E-51059IPR009057Homeodomain-like
CDDcd000868.80E-42159No hitNo description
PROSITE profilePS5084840.996235473IPR002913START domain
CDDcd088751.58E-92240468No hitNo description
SuperFamilySSF559611.18E-26242469No hitNo description
PfamPF018523.6E-32244469IPR002913START domain
SMARTSM002341.5E-24244470IPR002913START domain
Gene3DG3DSA:3.30.530.206.1E-9297435IPR023393START-like domain
SuperFamilySSF559612.2E-10528667No hitNo description
SuperFamilySSF559612.2E-10696738No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 747 aa     Download sequence    Send to blast
MSSSVTGAAG SGDDGRSSNN KGKRPAYKRL TSAQTAKLEK YIIDCPHPDE AQRRQLAEEN  60
QHERADNNAL RAENERIQNE NLLMKEALNN ILCPSCGGPP AAGEDHEHFM QKMLLENAHL  120
KEEASLNSFN TSSFQHVSHG KISNILSRYL EKEVLHPEDI EQLNAIPNNI DIAGSSSTTP  180
LYDFSVANGT LLNQQQGVSI NDVVAGPSSS LLHHQNYVPP PIVADNNNNG EQGVAVMEVA  240
LASEVAATAM DELLRLIRLN EPFWVGSAFD GKLVLHGESY EKMFPRVYQF NDGNSRVESS  300
KESGIVNISG IQLVDLFLDS EKWANAFPTI VTKAQTLEVF EIGLPESRSG ALQLMYEEMH  360
GFSPLVASRE FQFLRHCHQL EPGSWIITDV SFDSLRNYPF RLPRSRSWRR PSGCLIQELP  420
NSTSCMVTWI EHVEVDDKIQ THRLYRDLVS TNAAYGAQRW IMELQRMCLR SMSYALENIP  480
DHEYGGVINT NEGRRSVMRL GQRLVRLFSE NLNMSGKVEF PQLSVEYNSG VRISARRCTE  540
KGQPNGTIVI AATSLWLPLH YHTVFEFLTD INKRSQWDVL FCTTPVHYIA HISNGTHPAN  600
NTSIIQPFMS SENNAVIIQE SFIDPVGSSY IVYAPADVEA IHVAISGEDS STIPILPSGF  660
VVCGDGRASM MSNSTIIAPS VLGGVGSYGY QHRSEGGSLL TVAFQILVNT ITCGPNLVNM  720
ESVDSINTLL TSTVQKIKDA LNCNALH
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.BU38Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020997095.10.0homeobox-leucine zipper protein HDG11-like
TrEMBLA0A444WNS90.0A0A444WNS9_ARAHY; Uncharacterized protein
STRINGGLYMA15G13950.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF10263398
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03260.11e-157homeodomain GLABROUS 8